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CDS Information : APE_0919

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 602,220 / 602,984 / +
Location 602220..602984
Type CDS
Length 765 bp (254 aa)

close this sectionAnnotation

Product branched-chain amino acid ABC transporter, ATP binding protein
Gene name livG
Functional category Cell envelope and cellular processes
- Transport/binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:P30293 Pubmed:1429514
Uniprot:P21629 Pubmed:2120183

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Proteome results
2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
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UniProtQ9YDJ4
INSDBAA79903.1 (DDBJ GenBank EMBL)
RefSeqNP_147597.1
GI14601071
GeneID1445002
UniParcUPI000005DD3C

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-142Q9YDJ4_AERPEBranched-chain amino acid ABC transporter, ATP binding proteinAlignment
2E=3e-73LIVG_ARCFUProbable branched-chain amino acid transport ATP-binding protein livGAlignment
3E=3e-73C8S8I3_FERPLABC transporter related proteinAlignment
4E=2e-71D2RE28_ARCPAABC transporter related proteinAlignment
5E=4e-71A8AAG1_IGNH4ABC transporter relatedAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003439 ABC transporter related (Domain)
 [7-254]  PS50893
PS50893   ABC_TRANSPORTER_2
 [154-168]  PS00211
PS00211   ABC_TRANSPORTER_1
 [46-181]  3.5e-17 PF00005
PF00005   ABC_tran
IPR003593 AAA+ ATPase, core (Domain)
 [31-248]  1.69999922284049e-10 SM00382
SM00382   AAA
IPR017871 ABC transporter, conserved site (Conserved_site)
 [154-168]  PS00211
PS00211   ABC_TRANSPORTER_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 254 amino acids
molecular mass 27,862.65 Da
pI 9.73
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.5
(19aa)		7.9
(20aa)		11.4
(29aa)		8.3
(21aa)		3.1
(8aa)		1.2
(3aa)		3.9
(10aa)		3.9
(10aa)		11.8
(30aa)		4.3
(11aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.5
(9aa)		0
(0aa)		3.5
(9aa)		0.8
(2aa)		2.4
(6aa)		6.3
(16aa)		1.2
(3aa)		7.1
(18aa)		4.3
(11aa)		7.5
(19aa)

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