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CDS Information : APE_1090

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 692,832 / 692,371 / -
Location complement(692371..692832)
Type CDS
Length 462 bp (153 aa)

close this sectionAnnotation

Product 30S ribosomal protein S19e
Gene name rps19e
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q94613 Pubmed:9332378
Uniprot:P19952 Pubmed:3315748

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Proteome results
2D-PAGE
 1D-PAGE-LC
 MDLC
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UniProtQ9YD22
INSDBAA80075.1 (DDBJ GenBank EMBL)
RefSeqNP_147710.1
GI14601178
GeneID1445784
UniParcUPI000005DDE8

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=2e-82RS19E_AERPE30S ribosomal protein S19eAlignment
2E=4e-56A2BN53_HYPBU30S ribosomal protein S19EAlignment
3E=4e-55A3DNH1_STAMFSSU ribosomal protein S19EAlignment
4E=5e-55D3CPL4_9CRENRibosomal protein S19eAlignment
5E=2e-46A8A965_IGNH4SSU ribosomal protein S19EAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001266 Ribosomal protein S19e (Family)
 [4-142]  3.7e-52 PF01090
PF01090   Ribosomal_S19e
 [89-108]  PS00628
PS00628   RIBOSOMAL_S19E
 [30-113]  PD003854
PD003854   Ribosomal_S19e
IPR018277 Ribosomal protein S19e, conserved site (Conserved_site)
 [89-108]  PS00628
PS00628   RIBOSOMAL_S19E
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 153 amino acids
molecular mass 17,486.33 Da
pI 10.87
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.5
(13aa)		6.5
(10aa)		9.2
(14aa)		5.2
(8aa)		2
(3aa)		2
(3aa)		9.2
(14aa)		1.3
(2aa)		7.2
(11aa)		3.9
(6aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(8aa)		0
(0aa)		1.3
(2aa)		2.6
(4aa)		3.9
(6aa)		7.8
(12aa)		1.3
(2aa)		11.8
(18aa)		2.6
(4aa)		8.5
(13aa)

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