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CDS Information : APE_1139

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 711,198 / 711,650 / +
Location 711198..711650
Type CDS
Length 453 bp (150 aa)

close this sectionAnnotation

Product 30S ribosomal protein S15P/S13e
Gene name rps15p
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q05761 Pubmed:8448368

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Proteome results
2D-PAGE
 1D-PAGE-LC
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UniProtQ9YCX3
INSDBAA80124.1 (DDBJ GenBank EMBL)
RefSeqNP_147737.1
GI14601204
GeneID1445810
UniParcUPI000005DE19

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-79RS15_AERPE30S ribosomal protein S15P/S13eAlignment
2E=4e-55RS15_HYPBU30S ribosomal protein S15P/S13eAlignment
3E=7e-55RS15_STAMF30S ribosomal protein S15P/S13eAlignment
4E=4e-54D3CPX4_9CRENRibosomal S13S15 domain proteinAlignment
5E=7e-53RS15_IGNH430S ribosomal protein S15P/S13eAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000589 Ribosomal protein S15 (Family)
 [66-148]  3.2e-18 PF00312
PF00312   Ribosomal_S15
 [96-126]  PS00362
PS00362   RIBOSOMAL_S15
IPR005290 Ribosomal protein S15, bacterial chloroplast and mitochondrial type (Family)
 [88-132]  PD157043
PD157043   PD157043
IPR009068 S15/NS1, RNA-binding (Domain)
 [63-141]  8e-22 SSF47060
SSF47060   S15/NS1_bind
IPR012606 Ribosomal S13S15 N-terminal (Domain)
 [1-58]  1.1e-21 PF08069
PF08069   Ribosomal_S13_N
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 150 amino acids
molecular mass 17,302.40 Da
pI 10.43
aa composition
AlaValLeuIlePheTrpProMetGlySer
4
(6aa)		5.3
(8aa)		14
(21aa)		6.7
(10aa)		0.7
(1aa)		1.3
(2aa)		10.7
(16aa)		2
(3aa)		6.7
(10aa)		4
(6aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
2
(3aa)		0
(0aa)		1.3
(2aa)		2.7
(4aa)		4
(6aa)		10.7
(16aa)		4
(6aa)		8
(12aa)		4.7
(7aa)		7.3
(11aa)

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