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CDS Information : APE_1386.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 882,909 / 884,165 / +
Location 882909..884165
Type CDS
Length 1,257 bp (418 aa)

close this sectionAnnotation

Product NADP-dependent glutamate dehydrogenase (GDH)
Gene name
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number 1.4.1.4
Note
KEGG pathway
Sequence feature
References DOGAN:APE_1386.1 Pubmed:11139075,11549007,12036066,12136148,12172610

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
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close this sectionRelated links to external database

UniProtQ9YC65 : N-term changed (-15)
INSDBAA80383.2 (DDBJ GenBank EMBL)
RefSeqNP_147912.1 : N-term changed (-15)
GI14601376 : N-term changed (-15)
GeneID1445984 : N-term changed (-15)
UniParcUPI000005DF1C : N-term changed (-15)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0DHE3_AERPEGlutamate dehydrogenaseAlignment
2E=1e-151A2BL51_HYPBUGlutamate dehydrogenaseAlignment
3E=1e-145A3DLU5_STAMFGlutamate dehydrogenase (NADP)Alignment
4E=1e-145D3CNP0_9CRENGlu/Leu/Phe/Val dehydrogenaseAlignment
5E=1e-145A1RYG4_THEPDGlutamate dehydrogenase (NADP)Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR006095 Glu/Leu/Phe/Val dehydrogenase (Family)
 [91-105]  1.70000295590053e-33 PR00082 [171-193]  1.70000295590053e-33 PR00082 [213-233]  1.70000295590053e-33 PR00082 [340-351]  1.70000295590053e-33 PR00082
PR00082   GLFDHDRGNASE
 [99-112]  PS00074
PS00074   GLFV_DEHYDROGENASE
IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (Domain)
 [180-416]  2.39999999999997e-69 PF00208
PF00208   ELFV_dehydrog
 [182-416]  8.79996401030984e-92 SM00839
SM00839   ELFV_dehydrog
IPR006097 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (Domain)
 [34-163]  2.29999999999998e-46 PF02812
PF02812   ELFV_dehydrog_N
IPR014362 Glutamate dehydrogenase (Family)
 [1-418]  PIRSF000185
PIRSF000185   Glu_DH
IPR016040 NAD(P)-binding domain (Domain)
 [180-418]  1.4e-70 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
 [179-417]  2.39999798157241e-71 SSF51735
SSF51735   NAD(P)-bd
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 418 amino acids
molecular mass 46,171.09 Da
pI 6.84
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.1
(34aa)		10.3
(43aa)		8.1
(34aa)		6.2
(26aa)		1.9
(8aa)		1.9
(8aa)		4.5
(19aa)		3.1
(13aa)		9.6
(40aa)		4.3
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.3
(22aa)		0
(0aa)		4.3
(18aa)		2.4
(10aa)		4.1
(17aa)		6.7
(28aa)		0.7
(3aa)		5.7
(24aa)		5.3
(22aa)		7.4
(31aa)

open this sectionSequence