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CDS Information : APE_1505.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 953,070 / 953,816 / +
Location 953070..953816
Type CDS
Length 747 bp (248 aa)

close this sectionAnnotation

Product conserved hypothetical protein
Gene name
Functional category Similar to unknown proteins
- From B. subtilis
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q9Z3H2 Pubmed:9727980,12477935,12604787

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
Show sequence

close this sectionRelated links to external database

UniProtQ9YBU4 : N-term changed (-9)
INSDBAA80504.2 (DDBJ GenBank EMBL)
UniParcUPI000005DF95 : N-term changed (-9)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-137Y1505_AERPEUPF0273 protein APE_1505.1Alignment
2E=1e-116A2BJX3_HYPBURecA-superfamily ATPase, Rad55Alignment
3E=1e-113D3CPR5_9CRENPutative circadian clock protein, KaiCAlignment
4E=1e-112A3DNK8_STAMFPutative circadian clock protein, KaiCAlignment
5E=1e-109A8A974_IGNH4Putative circadian clock protein, KaiCAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR004504 DNA repair protein RadA (Family)
 [14-42]  1.10000029896148e-08 PR01874 [56-73]  1.10000029896148e-08 PR01874 [167-195]  1.10000029896148e-08 PR01874
PR01874   DNAREPAIRADA
IPR010624 Circadian clock protein KaiC (Domain)
 [3-247]  PS51146
PS51146   KAIC
IPR010624 Circadian clock protein KaiC (Family)
 [3-247]  PS51146
PS51146   KAIC
IPR014774 Circadian clock protein KaiC, central region (Domain)
 [5-237]  5.6e-84 PF06745
PF06745   KaiC
IPR014774 Circadian clock protein KaiC/DNA repair protein RadA (Region)
 [5-237]  5.6e-84 PF06745
PF06745   KaiC
IPR022475 Uncharacterised protein family UPF0273, KiaC-like (Family)
 [2-239]  TIGR03877
TIGR03877   Thermo_KaiC_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 248 amino acids
molecular mass 27,384.72 Da
pI 9.24
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.2
(13aa)		12.9
(32aa)		8.9
(22aa)		7.3
(18aa)		2.8
(7aa)		1.2
(3aa)		4
(10aa)		2.4
(6aa)		11.3
(28aa)		5.2
(13aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.4
(11aa)		0
(0aa)		1.2
(3aa)		2
(5aa)		2.8
(7aa)		4.8
(12aa)		1.6
(4aa)		8.9
(22aa)		6.5
(16aa)		6.5
(16aa)

open this sectionSequence