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CDS Information : APE_1702

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,072,393 / 1,073,154 / +
Location 1072393..1073154
Type CDS
Length 762 bp (253 aa)

close this sectionAnnotation

Product ATPase involved in Fe-S cluster formation SufC
Gene name sufC
Functional category Information pathways
- Protein modification
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q9EXP4 Pubmed:11251816,12554644
Uniprot:Q9X188 Pubmed:11943156
Uniprot:P77499 Pubmed:12089140

close this sectionProteome

Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
Show sequence

close this sectionRelated links to external database

UniProtQ9YB95
INSDBAA80703.1 (DDBJ GenBank EMBL)
UniParcUPI000005E05B

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-140Q9YB95_AERPEATPase involved in Fe-S cluster formation SufCAlignment
2E=5e-63B8IRX5_METNOFeS assembly ATPase SufCAlignment
3E=1e-61B0UIV7_METS4FeS assembly ATPase SufCAlignment
4E=2e-61A3DKS0_STAMFFeS assembly ATPase SufCAlignment
5E=3e-61A2TV16_9FLAOABC transporter, ATP-binding proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003439 ABC transporter related (Domain)
 [3-247]  PS50893
PS50893   ABC_TRANSPORTER_2
 [51-173]  5.5e-08 PF00005
PF00005   ABC_tran
IPR003593 AAA+ ATPase, core (Domain)
 [27-224]  1.6999992228405e-07 SM00382
SM00382   AAA
IPR010230 FeS assembly ATPase SufC (Family)
 [3-245]  1.79999754022378e-90 TIGR01978
TIGR01978   sufC
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 253 amino acids
molecular mass 28,044.65 Da
pI 8.67
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.3
(16aa)		8.7
(22aa)		11.9
(30aa)		7.1
(18aa)		2.8
(7aa)		0
(0aa)		4.3
(11aa)		3.2
(8aa)		10.3
(26aa)		5.1
(13aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
1.6
(4aa)		0
(0aa)		2.4
(6aa)		3.2
(8aa)		3.6
(9aa)		7.9
(20aa)		0.8
(2aa)		6.7
(17aa)		5.9
(15aa)		8.3
(21aa)

open this sectionSequence