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CDS Information : APE_2050.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,289,051 / 1,288,041 / -
Location complement(1288041..1289051)
Type CDS
Length 1,011 bp (336 aa)

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Product putative methylcobalamin:homocysteine methyltransferase (putative methionine synthase)
Gene name
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number 2.1.1.-
Note
KEGG pathway
Sequence feature
References Uniprot:P25665 Pubmed:1339288,8823155,10625458
Uniprot:P55299 Pubmed:10469143

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
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UniProtQ9YA89
INSDBAA81060.2 (DDBJ GenBank EMBL)
UniParcUPI0000E5300C

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q9YA89_AERPEPutative methylcobalamin:homocysteine methyltransferaseAlignment
2E=2e-55A2BKR6_HYPBUMethionine synthase II (Cobalamin-independent)Alignment
3E=2e-24A8AAH8_IGNH4Cobalamin-independent synthase MetE, N-terminal domain proteinAlignment
4E=3e-23B5YAI9_DICT6Probable methylcobalamin:homocysteine methyltransferase, putativeAlignment
5E=2e-22B9LR31_HALLTMethionine synthase vitamin-B12 independentAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR013215 Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (Domain)
 [6-68]  0.00089 PF08267 [74-287]  1.2e-36 PF08267
PF08267   Meth_synt_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 336 amino acids
molecular mass 36,576.06 Da
pI 4.82
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.6
(39aa)		9.8
(33aa)		11
(37aa)		5.4
(18aa)		3
(10aa)		0.9
(3aa)		6
(20aa)		1.8
(6aa)		8
(27aa)		6.3
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.2
(14aa)		0
(0aa)		1.8
(6aa)		2.7
(9aa)		4.5
(15aa)		3.9
(13aa)		0.6
(2aa)		6.3
(21aa)		3.9
(13aa)		8.6
(29aa)

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