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CDS Information : APE_2158.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,369,680 / 1,368,481 / -
Location complement(1368481..1369680)
Type CDS
Length 1,200 bp (399 aa)

close this sectionAnnotation

Product acyl-CoA dehydrogenase
Gene name
Functional category Intermediary metabolism
- Metabolism of lipids
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:P16219 Pubmed:2565344
Uniprot:P15651 Pubmed:2777793

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
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UniProtQ9Y9Y1
INSDBAA81169.2 (DDBJ GenBank EMBL)
UniParcUPI0000E53040

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q9Y9Y1_AERPEAcyl-CoA dehydrogenaseAlignment
2E=1e-137A4YDS5_METS5Acyl-CoA dehydrogenase domain proteinAlignment
3E=1e-123Q8ZXA3_PYRAEAcyl-CoA dehydrogenaseAlignment
4E=1e-121Q4J9Q5_SULACAcyl-CoA dehydrogenaseAlignment
5E=1e-121A1RUG1_PYRILButyryl-CoA dehydrogenaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR006089 Acyl-CoA dehydrogenase, conserved site (Conserved_site)
 [349-368]  PS00073
PS00073   ACYL_COA_DH_2
IPR006089 Acyl-CoA dehydrogenase (Domain)
 [349-368]  PS00073
PS00073   ACYL_COA_DH_2
IPR006089 Acyl-CoA dehydrogenase (Family)
 [349-368]  PS00073
PS00073   ACYL_COA_DH_2
IPR006090 Acyl-CoA dehydrogenase, type 1 (Domain)
 [242-390]  2.19999999999997e-47 PF00441
PF00441   Acyl-CoA_dh_1
IPR006091 Acyl-CoA dehydrogenase/oxidase, central region (Domain)
 [130-238]  1.3999989204989e-32 G3DSA:2.40.110.10
G3DSA:2.40.110.10   Acyl_CoA_DH/ox_M
 [133-181]  4.3e-16 PF02770
PF02770   Acyl-CoA_dh_M
IPR006092 Acyl-CoA dehydrogenase, N-terminal (Domain)
 [16-127]  2.4e-29 PF02771
PF02771   Acyl-CoA_dh_N
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal (Domain)
 [241-393]  1.79999754022378e-52 SSF47203
SSF47203   AcylCoADH_C_like
IPR009100 Acyl-CoA dehydrogenase/oxidase, middle and N-terminal (Domain)
 [11-240]  2.29998420488559e-86 SSF56645
SSF56645   AcylCoA_dehyd_NM
IPR013764 Acyl-CoA dehydrogenase, type1/2, C-terminal (Domain)
 [239-393]  1.30000495407324e-52 G3DSA:1.20.140.10
G3DSA:1.20.140.10   AcylCoA_DH_1/2_C
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal (Domain)
 [12-127]  4.79998722798104e-36 G3DSA:1.10.540.10
G3DSA:1.10.540.10   AcylCoA_DH/ox_N
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 399 amino acids
molecular mass 44,553.16 Da
pI 6.29
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.3
(41aa)		7.8
(31aa)		7.3
(29aa)		8.5
(34aa)		4.8
(19aa)		1.3
(5aa)		3.8
(15aa)		2
(8aa)		8.8
(35aa)		3
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.5
(22aa)		0
(0aa)		2.5
(10aa)		4.3
(17aa)		3.3
(13aa)		5.5
(22aa)		1.5
(6aa)		6.8
(27aa)		4
(16aa)		9.3
(37aa)

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