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CDS Information : APE_2173.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,380,078 / 1,379,425 / -
Location complement(1379425..1380078)
Type CDS
Length 654 bp (217 aa)

close this sectionAnnotation

Product 50S ribosomal protein L1P
Gene name rpl1p
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References HAMAP:MF_01318

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Proteome results
2D-PAGE
 1D-PAGE-LC
 MDLC
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UniProtQ9Y9W6 : N-term changed (-15)
INSDBAA81184.2 (DDBJ GenBank EMBL)
UniParcUPI000005E23C : N-term changed (-15)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-120RL1_AERPE50S ribosomal protein L1PAlignment
2E=1e-58B8D5P8_DESK150S ribosomal protein L1PAlignment
3E=3e-58RL1_HYPBU50S ribosomal protein L1PAlignment
4E=1e-57A8ABQ6_IGNH4LSU ribosomal protein L1PAlignment
5E=5e-53RL1_STAMF50S ribosomal protein L1PAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR002143 Ribosomal protein L1 (Family)
 [1-216]  9.09992432541739e-91 PIRSF002155
PIRSF002155   Ribosomal_L1
 [4-210]  6.80000000000006e-50 PF00687
PF00687   Ribosomal_L1
 [1-214]  2.9999875044572e-56 SSF56808
SSF56808   Ribosomal_L1
IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich (Domain)
 [5-214]  6.3e-27 G3DSA:3.30.190.20
G3DSA:3.30.190.20   Ribosomal_L1_2-a/b-sand
IPR023674 Ribosomal protein L1, superfamily (Domain)
 [1-214]  2.9999875044572e-56 SSF56808
SSF56808   Ribosomal_L1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 217 amino acids
molecular mass 24,134.41 Da
pI 10.73
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.7
(21aa)		10.1
(22aa)		9.7
(21aa)		6.9
(15aa)		0.9
(2aa)		0.9
(2aa)		6.9
(15aa)		2.8
(6aa)		6.5
(14aa)		3.7
(8aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
1.8
(4aa)		0.9
(2aa)		4.1
(9aa)		4.6
(10aa)		1.4
(3aa)		8.3
(18aa)		0.5
(1aa)		9.2
(20aa)		3.7
(8aa)		7.4
(16aa)

open this sectionSequence