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CDS Information : APE_2174

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,380,450 / 1,380,124 / -
Location complement(1380124..1380450)
Type CDS
Length 327 bp (108 aa)

close this sectionAnnotation

Product 50S ribosomal protein L11P
Gene name rpl11p
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References HAMAP:MF_00736

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
Show sequence

close this sectionRelated links to external database

UniProtQ9Y9W5
INSDBAA81185.1 (DDBJ GenBank EMBL)
UniParcUPI000005E23D

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-53RL11_AERPE50S ribosomal protein L11PAlignment
2E=5e-40RL11_HYPBU50S ribosomal protein L11PAlignment
3E=3e-31RL11_SULAC50S ribosomal protein L11PAlignment
4E=3e-31A8ABQ5_IGNH4LSU ribosomal protein L11PAlignment
5E=7e-31RL11_SULTO50S ribosomal protein L11PAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000911 Ribosomal protein L11 (Family)
 [62-77]  PS00359
PS00359   RIBOSOMAL_L11
 [7-76]  3.6e-19 SSF46906
SSF46906   Ribosomal_L11
 [7-76]  1.09999909120792e-15 G3DSA:1.10.10.250
G3DSA:1.10.10.250   Ribosomal_L11
 [8-75]  4.00000000000001e-18 PF00298
PF00298   Ribosomal_L11
 [1-76]  0.000559999989417023 SM00649
SM00649   RL11
IPR020783 Ribosomal protein L11, C-terminal (Domain)
 [7-76]  1.09999909120792e-15 G3DSA:1.10.10.250
G3DSA:1.10.10.250   Ribosomal_L11
 [8-75]  4.00000000000001e-18 PF00298
PF00298   Ribosomal_L11
 [7-76]  3.6e-19 SSF46906
SSF46906   Ribosomal_L11
IPR020785 Ribosomal protein L11, conserved site (Conserved_site)
 [62-77]  PS00359
PS00359   RIBOSOMAL_L11
SignalP 
 [1-23]  0.501 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 108 amino acids
molecular mass 11,642.45 Da
pI 5.95
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.2
(11aa)		10.2
(11aa)		8.3
(9aa)		6.5
(7aa)		0.9
(1aa)		0.9
(1aa)		5.6
(6aa)		0.9
(1aa)		7.4
(8aa)		5.6
(6aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.6
(6aa)		0
(0aa)		0
(0aa)		2.8
(3aa)		1.9
(2aa)		13.9
(15aa)		0.9
(1aa)		1.9
(2aa)		6.5
(7aa)		10.2
(11aa)

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