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CDS Information : APE_2470

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 1,570,727 / 1,571,038 / +
Location 1570727..1571038
Type CDS
Length 312 bp (103 aa)

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Product 30S ribosomal protein S25e
Gene name rps25e
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:P62851 Pubmed:1748303

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Proteome results
2D-PAGE
 1D-PAGE-LC
 MDLC
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UniProtQ9Y914
INSDBAA81486.1 (DDBJ GenBank EMBL)
UniParcUPI000005E36A

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BLASTP
Database:UniProtKB:2010_04
1E=6e-51RS25_AERPE30S ribosomal protein S25eAlignment
2E=1e-08B8D5A7_DESK130S ribosomal protein S25eAlignment
3E=1e-08A8A8X5_IGNH4SSU ribosomal protein S25EAlignment
4E=1e-07A2BLT6_HYPBU30S ribosomal protein S25eAlignment
5E=5e-07RS25_PYRAE30S ribosomal protein S25eAlignment
HAMAP No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 103 amino acids
molecular mass 11,712.87 Da
pI 11.03
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.8
(8aa)		9.7
(10aa)		8.7
(9aa)		3.9
(4aa)		1.9
(2aa)		1
(1aa)		7.8
(8aa)		2.9
(3aa)		6.8
(7aa)		2.9
(3aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.9
(4aa)		0
(0aa)		1
(1aa)		3.9
(4aa)		1
(1aa)		13.6
(14aa)		1
(1aa)		9.7
(10aa)		1
(1aa)		11.7
(12aa)

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