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CDS Information : BBR47_02690

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close this sectionGenomic map

Display Clone

Brevibacillus brevis NBRC 100599 chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Brevibacillus brevis NBRC 100599
Replicon chromosome
Start / Stop / Direction 271,353 / 272,699 / +
Location 271353..272699
Type CDS
Length 1,347 bp (448 aa)

close this sectionAnnotation

Product phosphoglucosamine mutase
Gene name glmM
Functional category Cell envelope and cellular processes
- Cell wall
EC number 5.4.2.10
Note
KEGG pathway
Sequence feature
References Family/Domain:IPR006352
HAMAP:MF_01554_B

close this sectionComputational search results

BLASTP
Database:UniProtKB:13.0
1E=1e-167GLMM_GEOTNPhosphoglucosamine mutaseAlignment
2E=1e-167GLMM_GEOKAPhosphoglucosamine mutaseAlignment
3E=1e-166A6CNR0_9BACIYbbTAlignment
4E=1e-165GLMM_BACSUPhosphoglucosamine mutaseAlignment
5E=1e-165A9VPC3_9BACIPhosphoglucosamine mutaseAlignment
HAMAP
Database:HAMAP:20080521
 [1-446]  45.501 MF_01554_B
MF_01554_B   GLMM
InterPro
Database:interpro:16.0
IPR005841 Alpha-D-phosphohexomutase, N-terminal (Domain)
 [95-109]  1.6e-13 PR00509 [175-194]  1.6e-13 PR00509 [235-250]  1.6e-13 PR00509
PR00509   PGMPMM
IPR005841 Phosphoglucomutase/phosphomannomutase (Family)
 [95-109]  1.6e-13 PR00509 [175-194]  1.6e-13 PR00509 [235-250]  1.6e-13 PR00509
PR00509   PGMPMM
 [96-105]  PS00710
PS00710   PGM_PMM
IPR005843 Phosphoglucomutase/phosphomannomutase C-terminal (Domain)
 [375-445]  5.1e-11 PF00408
PF00408   PGM_PMM_IV
IPR005844 Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (Domain)
 [2-140]  3.6e-62 PF02878
PF02878   PGM_PMM_I
IPR005845 Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (Domain)
 [159-257]  1.2e-29 PF02879
PF02879   PGM_PMM_II
IPR005846 Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III (Domain)
 [259-371]  2.2e-27 PF02880
PF02880   PGM_PMM_III
IPR006352 Phosphoglucosamine mutase (Family)
 [5-445]  4e-257 TIGR01455
TIGR01455   glmM: phosphoglucosamine mutase
IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (Domain)
 [2-182]  2.4e-54 SSF53738 [158-258]  1.9e-29 SSF53738 [259-368]  4.7e-34 SSF53738
SSF53738   Phosphoglucomutase, first 3 domains
 [4-134]  1.5e-41 G3DSA:3.40.120.10 [177-251]  3.9e-21 G3DSA:3.40.120.10 [252-371]  3.1e-32 G3DSA:3.40.120.10
G3DSA:3.40.120.10   no description
IPR016066 Alpha-D-phosphohexomutase, conserved site (Conserved_site)
 [96-105]  PS00710
PS00710   PGM_PMM
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 448 amino acids
molecular mass 47,995.70 Da
pI 4.82
aa composition
AlaValLeuIlePheTrpProMetGlySer
8
(36aa)
10
(45aa)
10
(45aa)
5.6
(25aa)
2.9
(13aa)
0
(0aa)
2.9
(13aa)
2.5
(11aa)
11.4
(51aa)
4.7
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.1
(23aa)
1.1
(5aa)
5.6
(25aa)
3.3
(15aa)
2.2
(10aa)
5.4
(24aa)
1.3
(6aa)
4.7
(21aa)
5.8
(26aa)
7.4
(33aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G10-001-009 BB1FE1L10029E04 265,703 304,114 38,412

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.