CDS Information : BBR47_03000

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	300,945 / 300,364 / -
Location	complement(300364..300945)
Type	CDS
Length	582 bp (193 aa)

Product	probable transcriptional regulator
Gene name
Functional category	Information pathways - RNA synthesis - - Regulation
EC number
Note	TetR family.
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-82 A3I6Y4_9BACI Transcriptional regulator, TetR family protein Alignment 2 E=4e-73 Q3EME1_BACTI Transcriptional regulator, TetR family Alignment 3 E=1e-72 A8FER7_BACP2 TetR family transcriptional regulator Alignment 4 E=1e-72 Q638U5_BACCZ Transcriptional regulator, TetR family Alignment 5 E=2e-72 A9VLR9_9BACI Transcriptional regulator, TetR family Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001647 Bacterial regulatory protein, TetR (Domain) PF00440   TetR_N PR00455   HTHTETR PS50977   HTH_TETR_2 IPR009057 Homeodomain-like (Domain) SSF46689   Homeodomain-like IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal (Domain) SSF48498   Tetracyclin repressor-like, C-terminal domain IPR012287 Homeodomain-related (Domain) G3DSA:1.10.10.60   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	Transmembrane 1

size of protein	193 amino acids
molecular mass	22,145.28 Da
pI	5.17
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7.3 (14aa) 4.7 (9aa) 10.4 (20aa) 6.7 (13aa) 5.7 (11aa) 0.5 (1aa) 2.1 (4aa) 3.1 (6aa) 4.1 (8aa) 8.3 (16aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.8 (15aa) 1 (2aa) 2.1 (4aa) 3.6 (7aa) 2.6 (5aa) 5.2 (10aa) 1.6 (3aa) 7.8 (15aa) 4.7 (9aa) 10.9 (21aa)

>BBR47_03000 probable transcriptional regulator
ATGGCAAGAACACGCGAATTTGACGAAGAAAAAGTACTTGATGCAGCTATGCAGCTTTTT
TGGGAGAAGGGGTATGAAGCTACCTCATTAAGTGATTTAACTTCCCGAATGGGTATCCAG
CGCCCCAGTATTTACTCAACCTTTGGAGACAAAAAAGAATTGTTCGAAGCCGCACTACGC
AGATACACGATGTCTCGTGCTTTGGAGATACGAACGAAGCTTCAAAACACGCCATCCGTA
AAAGAGGCATTTCGCCATTTTTTTAAAGAGGTGGCCGACGAGGAATATACGGAAGGTCTC
AGCCGAGGATGCTTTTGCATTAATACCATGGTCGAGCTAGCCCCTCATGATGAGAAATTT
GAGATTTTGACAAGGGAACACCAAATGTACCTCTCTGTCATTTTTCAAGAAACGATTGAG
CGAGGTATCCAATCAGGTGAACTCGATTCGAGTATAGACGCAAAAGCTACCGCCCAAGCG
CTTATCGTATCGTTAATTGGACTGACCGTAATCTTGAAATCTCGTCCCAATCGATCATTT
GTTGATAATTCGATAGAGGTTACGCTTACGTTACTTAGGTAA


>BBR47_03000 probable transcriptional regulator
MARTREFDEEKVLDAAMQLFWEKGYEATSLSDLTSRMGIQRPSIYSTFGDKKELFEAALR
RYTMSRALEIRTKLQNTPSVKEAFRHFFKEVADEEYTEGLSRGCFCINTMVELAPHDEKF
EILTREHQMYLSVIFQETIERGIQSGELDSSIDAKATAQALIVSLIGLTVILKSRPNRSF
VDNSIEVTLTLLR

NBRC No.	clone name	start	stop	length(bp)
G10-001-009	BB1FE1L10029E04	265,703	304,114	38,412
G10-001-010	BB1FE1L10033D08	292,603	334,912	42,310

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.