CDS Information : BBR47_05550

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	575,288 / 575,707 / +
Location	575288..575707
Type	CDS
Length	420 bp (139 aa)

Product	probable two-component response regulator
Gene name
Functional category	Information pathways - RNA synthesis - - Regulation
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:P24072 Pubmed:8369293,10196193

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=8e-27 A8F4W1_THELT Response regulator receiver protein Alignment 2 E=8e-27 A6LLJ1_THEM4 Response regulator receiver protein Alignment 3 E=1e-26 A2U858_BACCO Response regulator receiver protein Alignment 4 E=2e-26 A4IMA7_GEOTN Two-component response regulator Alignment 5 E=2e-26 Q3S857_BACPF CheY Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001789 Response regulator receiver (Domain) SM00448   no description PF00072   Response_reg PS50110   RESPONSE_REGULATORY PD000039   CHEY_THEMA_Q56312; IPR011006 CheY-like (Domain) SSF52172   CheY-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	139 amino acids
molecular mass	15,310.81 Da
pI	5.25
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.8 (15aa) 7.9 (11aa) 9.4 (13aa) 9.4 (13aa) 2.2 (3aa) 0.7 (1aa) 2.2 (3aa) 3.6 (5aa) 5.8 (8aa) 4.3 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.8 (8aa) 2.9 (4aa) 3.6 (5aa) 3.6 (5aa) 1.4 (2aa) 5.8 (8aa) 0.7 (1aa) 6.5 (9aa) 7.2 (10aa) 6.5 (9aa)

>BBR47_05550 probable two-component response regulator
ATGAATAGCATTCTGATTGTTGATGATACGGCGTTTACGAGACGTGTGCTGCGCAACATA
TTTGAGACGTTAGGACTGCATGTGGTTGCGGAAGCTGCTTCGGGAGAGGAGGCTGTTAGA
AATTACTGCTTGTACAAACCATCACTCGTTACGATGGACATTACCATGCCTGGCATGAAC
GGTTTGACTGCTTCACGCAAAATCATGGAGTTGGACAAGGATGCCAAGATCATTATTTGC
TCAGCAGTGTCTAGGAACGATACCGTCATCAAGGCGATTCAGGCAGGGGCGCGGGATTTC
ATTGCGAAGCCACTGCAGCTGGAGCGAATCGAATGGGCTGTCCAAAAATTGCTGGGAACA
GGAGTAGATGATTGTTGTGGGGATCGACAGGAGAAACAAATAGCTGAGGTGTTAGCATGA


>BBR47_05550 probable two-component response regulator
MNSILIVDDTAFTRRVLRNIFETLGLHVVAEAASGEEAVRNYCLYKPSLVTMDITMPGMN
GLTASRKIMELDKDAKIIICSAVSRNDTVIKAIQAGARDFIAKPLQLERIEWAVQKLLGT
GVDDCCGDRQEKQIAEVLA

NBRC No.	clone name	start	stop	length(bp)
G10-001-020	BB1FE1L10023F06	547,039	581,306	34,268
G10-001-021	BB1FE1L10034H02	570,921	607,128	36,208

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.