CDS Information : BBR47_07340

Display	1000bp 10000bp 100000bp Clone

Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	779,040 / 779,834 / +
Location	779040..779834
Type	CDS
Length	795 bp (264 aa)

Product	conserved hypothetical protein
Gene name	gspA
Functional category	Other functions - Adaptation to atypical conditions
EC number
Note	gspA in Bacillus subtilis. Similar to the glycosyl transferase, family 8 (IPR002495).
KEGG pathway
Sequence feature
References	Family/Domain:IPR002495 Uniprot:P25148 Pubmed:7768864

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=7e-46 Q65DI7_BACLD GspA Glycosyl Transferase Family 8 Alignment 2 E=1e-44 A8U5L7_9LACT General stress protein A Alignment 3 E=3e-43 GSPA_BACSU General stress protein A Alignment 4 E=6e-42 A8U5L8_9LACT General stress protein A Alignment 5 E=3e-41 A7ZA70_BACA2 GspA Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR002495 Glycosyl transferase, family 8 (Family) PF01501   Glyco_transf_8
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	264 amino acids
molecular mass	30,942.84 Da
pI	9.48
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 4.2 (11aa) 7.2 (19aa) 10.2 (27aa) 8.7 (23aa) 2.3 (6aa) 2.3 (6aa) 3.8 (10aa) 2.7 (7aa) 3 (8aa) 5.3 (14aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.9 (13aa) 0.4 (1aa) 5.7 (15aa) 3.4 (9aa) 5.7 (15aa) 11 (29aa) 4.5 (12aa) 3 (8aa) 8.3 (22aa) 3.4 (9aa)

>BBR47_07340 conserved hypothetical protein
GTGGGCACGATTCATATTGTAACAGCCGTTAATGATGGTTTTGCTATACATCTCGCAGTC
ATGTTATATTCCCTTTTTGAAAATAAGGTTTCGAAAAACCCAGTCATCGTTCACGTTATT
GACAGTCAGGTCTCTGGGGAAAATAAATCCATCTTAACGAAAACTGTGAAACGATTCCAT
GCTCAAATTAAATATGTCACTATTGATCCGACCCTATATGATGGATTCCTCGTCCGTGAT
CATCTAACGCAGGAAACCTATCATCGAATTTCTATTCCAGACCTGCTGGACAAAGAAGTT
GAAAAAGTGATTTATTTGGACAGTGATATCGTTATTAAAAAAGACATCACTCCATTATGG
AACACAAAGGTTGATCAATATTACCTTGCAGCGGTGATGGATTCTTGGCAAGGATTAAAC
AAGCTGAGACATGCCGATCTGGCTATTCCGGATGACTGTGATTACTTTAATGCAGGAGTA
TTAGTCATGAATTTGAAAAAATGGAGAGAGCATAACATCACAAAAAAGATTATGGATTAC
ATGAAAAAGAACCAAGGGATTATTCGTTATCCCAGTCAAGATCCGATGAATGCGATTCTT
CATGATAATTGGCTTCAACTTGACACAAAGTGGAATTATCAGTCCAAGCATCTTTATAAA
AGCAACCTGCGAATAGATCCGGCCATTATTCACTACACAGGGGAAGATAGCAAACCGTGG
TTGAGTAAAAAGCACCCGCTTCGAGAGGAGTATTTTAAATATCTTAAAAAAGTAAAGAAG
TTAAACTCCTTGTAG


>BBR47_07340 conserved hypothetical protein
MGTIHIVTAVNDGFAIHLAVMLYSLFENKVSKNPVIVHVIDSQVSGENKSILTKTVKRFH
AQIKYVTIDPTLYDGFLVRDHLTQETYHRISIPDLLDKEVEKVIYLDSDIVIKKDITPLW
NTKVDQYYLAAVMDSWQGLNKLRHADLAIPDDCDYFNAGVLVMNLKKWREHNITKKIMDY
MKKNQGIIRYPSQDPMNAILHDNWLQLDTKWNYQSKHLYKSNLRIDPAIIHYTGEDSKPW
LSKKHPLREEYFKYLKKVKKLNSL

NBRC No.	clone name	start	stop	length(bp)
G10-001-028	BB1FE1L10018G09	755,660	792,561	36,902
G10-001-029	BB1FE1L10017A10	775,049	809,642	34,594

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.