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CDS Information : BBR47_07470

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close this sectionGenomic map

Display Clone

Brevibacillus brevis NBRC 100599 chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Brevibacillus brevis NBRC 100599
Replicon chromosome
Start / Stop / Direction 788,466 / 787,606 / -
Location complement(787606..788466)
Type CDS
Length 861 bp (286 aa)

close this sectionAnnotation

Product conserved hypothetical protein
Gene name
Functional category Similar to unknown proteins
- Partially similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:13.0
1E=5e-22Q67M54_SYMTHConserved domain proteinAlignment
2E=8e-19Q8RCB2_THETNPutative uncharacterized proteinAlignment
3E=3e-18A3DHC0_CLOTHCopper amine oxidase-like proteinAlignment
4E=2e-17Q67NK2_SYMTHConserved domain proteinAlignment
5E=8e-17A3DEW1_CLOTHCopper amine oxidase-like protein precursorAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR012854 Copper amine oxidase, N-terminal (Domain)
 [172-255]  3.6e-21 G3DSA:3.30.457.10
G3DSA:3.30.457.10   no description
 [176-261]  3.6e-26 SSF55383
SSF55383   Copper amine oxidase, domain N
 [173-265]  9.8e-32 PF07833
PF07833   Cu_amine_oxidN1
SignalP
 [1-23]  1 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 286 amino acids
molecular mass 31,425.42 Da
pI 5.09
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.1
(26aa)
7.3
(21aa)
9.8
(28aa)
4.5
(13aa)
1.7
(5aa)
0.7
(2aa)
3.1
(9aa)
0.3
(1aa)
4.9
(14aa)
6.6
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.7
(25aa)
0
(0aa)
2.8
(8aa)
4.2
(12aa)
1
(3aa)
12.6
(36aa)
1.4
(4aa)
2.8
(8aa)
8
(23aa)
10.1
(29aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G10-001-028 BB1FE1L10018G09 755,660 792,561 36,902
G10-001-029 BB1FE1L10017A10 775,049 809,642 34,594

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.