CDS Information : BBR47_07910

Display	1000bp 10000bp 100000bp Clone

Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	839,551 / 840,576 / +
Location	839551..840576
Type	CDS
Length	1,026 bp (341 aa)

Product	probable ABC transporter substrate binding protein
Gene name
Functional category	Cell envelope and cellular processes - Transport/binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:Q47084 Pubmed:8596459 Uniprot:O87491 Pubmed:10049373

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=3e-97 Q5KZZ4_GEOKA Iron(III) dicitrate ABC transporter Lipoprotein Alignment 2 E=1e-94 A4IMY3_GEOTN Iron compound ABC transporter iron compound-bindingprotein Alignment 3 E=7e-90 Q2B6T0_9BACI Iron(III) dicitrate ABC transporter Lipoprotein Alignment 4 E=2e-86 Q4MN72_BACCE Iron(III) dicitrate-binding protein Alignment 5 E=6e-86 Q81V85_BACAN Iron compound ABC transporter, iron compound-binding protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR002491 ABC transporter periplasmic binding domain (Domain) PS50983   FE_B12_PBP PF01497   Peripla_BP_2 IPR002491 Periplasmic binding protein (Family) PF01497   Peripla_BP_2 PS50983   FE_B12_PBP
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 1
SOSUI	No significant hit

size of protein	341 amino acids
molecular mass	37,324.64 Da
pI	5.82
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10 (34aa) 8.5 (29aa) 8.5 (29aa) 4.4 (15aa) 3.2 (11aa) 1.8 (6aa) 4.4 (15aa) 2.9 (10aa) 6.2 (21aa) 7.3 (25aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.2 (21aa) 0.6 (2aa) 4.7 (16aa) 3.8 (13aa) 1.8 (6aa) 9.1 (31aa) 1.2 (4aa) 2.6 (9aa) 5.3 (18aa) 7.6 (26aa)

>BBR47_07910 probable ABC transporter substrate binding protein
ATGAAAAGTAAGACCAGTTTACGTACCATGCGCCACATCATGACCAGCTTCTTCGCGCTG
TGCTTGCTGGTTGTCCTTGCCGGTTGTGGAGGCAATGCCAATCAAGCTCAACAAGCGCCA
GCTGCATCAGGAACGACGACTGAGGCTACTCCAACATCAGCACCAGCCGATTCCAATGAA
GTACGTGAAGTGAAACACGCAATGGGTACCACTCCGATCAAGGGAACACCAGAACGCGTG
GTAATTTTAACAAATGAAGGTACCGAAGCCTTGCTTGCACTTGGCGTTAAGCCAATCGCT
GCTGTACAGTCATGGGATGAAGATCCTTGGTATCCTCACATCAAGGATGAGATGACAGGT
GTAGAAGTGTTGGGCTTCGAAGACCAGCCGAATCTCGAAGCGATTGTAAGCCTGAGCCCT
GATTTGATCATCGGGAACAAAGTACGTCATGAAAAGATTTACGATCAACTGTCCAAAATC
GCTCCAACCGTATTCTCAGAAGAGCTGTCCGGCAGATGGAAAAGCAACTTCATGCTTTAT
GCAGAAGCACTAAACAAGAAGTCGGAAGGCGAACAAGTCCTGAAAGAATTCGATGATCGT
GTAGCTGCTGCGAAAGCAAAGCTGGGTCCGAAAGCTTCTACCAAAGTATCCGTAGCAAAA
TTCTCCAAAAAAGGTGTACAAATCTATCAAAAAGATACCTTTAGCGGTGTGTTGCTCGAT
CAACTGGGACTCGCACGTCCAGCTTCCCAGGACGTAAACAACTTTGCAGAAATGATTAGT
GAAGAAGGTATGTCCGCTATGGATGGGGACATCCTGTTCTACTGGGTAACGGAGCCAACG
AAAGAATCTAAAGATGTTTCGAACAACGCGAAAAAATGGATGGAAAGCCCGGTTTTCAAA
TCTCTGAATGTGGCGAAGACCAATCAAGTTTACCAAGTAGACGAAACGGTTTGGAACAAA
GCAGGCGGCATCAAGGCAGCGAATTTGCTGCTCGAAGATATCGTGAAGCGCCTCGATGTG
AAGTAA


>BBR47_07910 probable ABC transporter substrate binding protein
MKSKTSLRTMRHIMTSFFALCLLVVLAGCGGNANQAQQAPAASGTTTEATPTSAPADSNE
VREVKHAMGTTPIKGTPERVVILTNEGTEALLALGVKPIAAVQSWDEDPWYPHIKDEMTG
VEVLGFEDQPNLEAIVSLSPDLIIGNKVRHEKIYDQLSKIAPTVFSEELSGRWKSNFMLY
AEALNKKSEGEQVLKEFDDRVAAAKAKLGPKASTKVSVAKFSKKGVQIYQKDTFSGVLLD
QLGLARPASQDVNNFAEMISEEGMSAMDGDILFYWVTEPTKESKDVSNNAKKWMESPVFK
SLNVAKTNQVYQVDETVWNKAGGIKAANLLLEDIVKRLDVK

NBRC No.	clone name	start	stop	length(bp)
G10-001-030	BB1FE1L10004H11	813,537	851,996	38,460

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.