CDS Information : BBR47_07920

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	840,834 / 841,892 / +
Location	840834..841892
Type	CDS
Length	1,059 bp (352 aa)

Product	fatty acid desaturase
Gene name	des
Functional category	Intermediary metabolism - Metabolism of lipids
EC number	1.14.99.-
Note
KEGG pathway
Sequence feature
References	Uniprot:O34653 Pubmed:9555904

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-135 A8VS98_9BACI Peptidase M23B Alignment 2 E=1e-134 Q81C02_BACCR Delta5 acyl-lipid desaturase Alignment 3 E=1e-134 A9VK34_9BACI Fatty acid desaturase Alignment 4 E=1e-134 A7Z1Q4_BACA2 Putitative fatty acid desaturase Alignment 5 E=1e-133 Q41GI2_9BACI Fatty acid desaturase Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR005804 Fatty acid desaturase, type 1 (Domain) PF00487   FA_desaturase IPR010257 Fatty acid desaturase, type 1, N-terminal (Domain) PD001081   Q81C02_BACCR_Q81C02; IPR012261 Fatty acid acyl-CoA desaturase (Family) PIRSF000347   Fatty acid (acyl-CoA) desaturase
SignalP	No significant hit
TMHMM	Transmembrane 6
SOSUI	Transmembrane 5

size of protein	352 amino acids
molecular mass	40,684.37 Da
pI	9.92
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 6.5 (23aa) 7.4 (26aa) 11.9 (42aa) 7.1 (25aa) 5.4 (19aa) 3.1 (11aa) 4 (14aa) 1.4 (5aa) 5.4 (19aa) 6.3 (22aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (17aa) 1.1 (4aa) 5.4 (19aa) 3.4 (12aa) 4.8 (17aa) 6 (21aa) 3.7 (13aa) 5.1 (18aa) 2.3 (8aa) 4.8 (17aa)

>BBR47_07920 fatty acid desaturase
ATGCATCAAGCCAACATTGCCGAGTTGAAAAAGAATGTTGCCCCCTTTGAAAAATCAGAC
ATGAAAAAGAGTATCCGACAGCTAATCAATACGTTAGTTCCGCTGATTCTGCTTTGGTAC
GGAGCTTATCTCAGTCTATCTGTGTCCTATTGGCTGACGCTGCCTATCGTCATTGTTGCA
GCTGGCTTCGTCATCCGTACCTTCATCATTTGCCACGATTGCTGCCACCAATCCTTTTTC
AAAAATCGTCGGGCGAATGACATTGTGGGGACGATTACTGGTGTGATTACCCTCGTTCCG
TATGAACAGTGGAAAAATAGTCACAATATTCACCATGCAACGAGCAGCAACCTCGACAAA
CGAGGCGTAGGCGATCTGTGGATGTTGACTGTTAATGAATATCTCGAATCTCCTATCTGG
CGTAAAATTGCTTATCGGCTGTATCGTAATCCGATTGTTATGTTTGGCTTGGGACCTATT
TTTGTCTTTTTGCTCCAATATCGTTTTAATGTAAAACGTGCTCGCCGCAAAGAGCGGTTG
AATACGTATCTGACGAATTTGCTGCTGGTCGGTCTTTATGCGGTCTTAATCTGGGCGGTT
GGCTGGCAAGCATTTCTGTTGATTCAAGGTCCGATCTTTTTTGTCTCAGGATTGTTTGGG
ATTTGGCTGTTTTATGTACAGCATACGTATGAGGATTCGTATTTTGAGAACGAAGAAGAG
TGGAGCTATGTGAAAGCAGCAGTAGAAGGAAGCTCCTACTACAAGCTGCCAAAGGTTTTG
CAATGGCTCACAGGCAATATTGGCTTTCACCACGTCCATCATTTAAGCCCACGGGTACCG
AATTACAACCTGGAAAAAGCACATAACGAGACACCACCGCTTCAGAAGGCGACAACGATT
ACACTGGCGGCCAGCGTGCAGTGCCTGCGTTTTCATTTATGGGATGAGAGCAACAAGCGC
TTTGTGAGCTTTAAAGGCATCAAGCGATTGACTGCTGCTCGATCAGAAGCGATCATGGAT
GCACTTCAAGGCTCCAAACCGAGTTTGGAAGGAAAATAA


>BBR47_07920 fatty acid desaturase
MHQANIAELKKNVAPFEKSDMKKSIRQLINTLVPLILLWYGAYLSLSVSYWLTLPIVIVA
AGFVIRTFIICHDCCHQSFFKNRRANDIVGTITGVITLVPYEQWKNSHNIHHATSSNLDK
RGVGDLWMLTVNEYLESPIWRKIAYRLYRNPIVMFGLGPIFVFLLQYRFNVKRARRKERL
NTYLTNLLLVGLYAVLIWAVGWQAFLLIQGPIFFVSGLFGIWLFYVQHTYEDSYFENEEE
WSYVKAAVEGSSYYKLPKVLQWLTGNIGFHHVHHLSPRVPNYNLEKAHNETPPLQKATTI
TLAASVQCLRFHLWDESNKRFVSFKGIKRLTAARSEAIMDALQGSKPSLEGK

NBRC No.	clone name	start	stop	length(bp)
G10-001-030	BB1FE1L10004H11	813,537	851,996	38,460

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.