CDS Information : BBR47_08320

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	884,525 / 885,394 / +
Location	884525..885394
Type	CDS
Length	870 bp (289 aa)

Product	probable transcriptional regulator
Gene name
Functional category	Information pathways - RNA synthesis - - Regulation
EC number
Note	AraC family.
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=2e-93 A8FAK9_BACP2 Transcriptional regulator Alignment 2 E=1e-90 A5A695_BACLD Probable transcriptional regulator Alignment 3 E=1e-90 Q65MU8_BACLD Putative uncharacterized protein Alignment 4 E=1e-86 A3I9M3_9BACI Putative uncharacterized protein Alignment 5 E=1e-37 Q9K766_BACHD Transcriptional regulator AraC/XylS family Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR000005 Helix-turn-helix, AraC type (Domain) PF00165   HTH_AraC SM00342   no description PR00032   HTHARAC PS00041   HTH_ARAC_FAMILY_1 PS01124   HTH_ARAC_FAMILY_2 IPR009057 Homeodomain-like (Domain) SSF46689   Homeodomain-like IPR010499 Bacterial transcription activator, effector binding (Domain) PF06445   AraC_E_bind IPR011256 Bacterial regulatory factor, effector (Domain) SSF55136   Probable bacterial effector-binding domain IPR012287 Homeodomain-related (Domain) G3DSA:1.10.10.60   no description IPR018062 HTH domain AraC-type, conserved site (Conserved_site) PS00041   HTH_ARAC_FAMILY_1 IPR020449 Transcription regulator HTH, AraC- type (Family) PR00032   HTHARAC IPR020449 Helix-turn-helix, AraC (Region) PR00032   HTHARAC
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	289 amino acids
molecular mass	33,492.75 Da
pI	5.12
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 6.9 (20aa) 4.5 (13aa) 6.9 (20aa) 7.6 (22aa) 6.9 (20aa) 0.3 (1aa) 3.8 (11aa) 2.4 (7aa) 6.6 (19aa) 5.5 (16aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.2 (15aa) 0.3 (1aa) 2.8 (8aa) 5.9 (17aa) 5.5 (16aa) 4.2 (12aa) 2.1 (6aa) 7.6 (22aa) 6.2 (18aa) 8.7 (25aa)

>BBR47_08320 probable transcriptional regulator
ATGGACACGTACAAGCGGATTCAGGACGCGATTGATTATGTCGAAGAGCATCTTCAGGAA
GAAATGAACATCACAGATATTGCTTCCAGGGCGCATTTCTCTGCGTTTCATTTTCAACGT
CTGTTTCAGGCAATCTCAGGCTTCAGTGTACAGGAGTACATTCGCAAGCGCAGACTGTCG
GAAGCTGCACTGGCACTAAAACAGACAAGTGACAATGTGCTCGAAATTGCCGTGACTTAT
CAATACCAGTCGCAGGAAGCATTGACTCGCGCTTTCGAGAAGCAGTTCGGCATTACACCT
GGGAGATATCGAAAAGAAAATCATTCGCTGCCTTATCTAGCCAAGATGGACTTTTTGGCC
TTTCGCCAAACGATCAAAGGGGAGATTATGATGAACAAACCAACCATCACGACATTGGAT
GACATTCGTATCATAGGGAGGAGGTTCCGGACGAGCTTACAGGATGAGCAGCACTTCAAA
GACATTCCGGGCTTCTATTATGAATTTGGACGTAATCAAGACTATTTGCGGATTCCGAAT
AAAGCAGCGGAGGATATGTCATACGGAATCGCCTGCGAATTTGAAGACGACGGGGGCTTT
TCCTTTGTGATCGGGGAGGCTGTGCATCAGGTTCCTGAAGAACTGTCCGAAGGCTTTATT
TCGCTCGTCTTGCCTGGCGGAAAATACGCGGAATTCAAAGTGACGGGTGATGCCGACCTT
GTGCAAAACACACGTCGCTACATTTATGGAACATGGTTACCTCAATCGAATTATGAGAGA
GGCGAGGGACCGGATTTTGAAGTGACAGATGTCAGAGGTTCACGCTTTCCTGAGGCGATG
AGAGTATCTATTTACATCCCGCTTCTATAG


>BBR47_08320 probable transcriptional regulator
MDTYKRIQDAIDYVEEHLQEEMNITDIASRAHFSAFHFQRLFQAISGFSVQEYIRKRRLS
EAALALKQTSDNVLEIAVTYQYQSQEALTRAFEKQFGITPGRYRKENHSLPYLAKMDFLA
FRQTIKGEIMMNKPTITTLDDIRIIGRRFRTSLQDEQHFKDIPGFYYEFGRNQDYLRIPN
KAAEDMSYGIACEFEDDGGFSFVIGEAVHQVPEELSEGFISLVLPGGKYAEFKVTGDADL
VQNTRRYIYGTWLPQSNYERGEGPDFEVTDVRGSRFPEAMRVSIYIPLL

NBRC No.	clone name	start	stop	length(bp)
G10-001-032	BB1FE1L10023E11	870,015	907,113	37,099

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.