CDS Information : BBR47_23950

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	2,477,456 / 2,477,902 / +
Location	2477456..2477902
Type	CDS
Length	447 bp (148 aa)

Product	anti-sigma-F factor
Gene name	spoIIAB
Functional category	Cell envelope and cellular processes - Sporulation
EC number	2.7.11.1
Note	spoIIAB in Bacillus subtilis.
KEGG pathway
Sequence feature
References	HAMAP:MF_00637 Uniprot:P10728 Pubmed:15175314,15294015

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=9e-50 SP2AB_PAEPO Anti-sigma F factor Stage II sporulation protein AB Alignment 2 E=1e-48 A6CMX2_9BACI Anti-sigma F factor Alignment 3 E=3e-46 Q2B696_9BACI Anti-sigma F factor Alignment 4 E=5e-46 A2UAQ9_BACCO Putative anti-sigma regulatory factor, serine/threonine protein kinase Alignment 5 E=6e-46 SP2AB_GEOKA Anti-sigma F factor Stage II sporulation protein AB Alignment
HAMAP Database:HAMAP:20080521	MF_00637   SP2AB
InterPro Database:interpro:16.0	IPR003594 ATP-binding region, ATPase-like (Domain) SSF55874   ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase G3DSA:3.30.565.10   no description SM00387   no description PF02518   HATPase_c IPR010194 Anti-sigma F factor (Family) TIGR01925   spIIAB: anti-sigma F factor
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	148 amino acids
molecular mass	16,359.61 Da
pI	4.16
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.5 (14aa) 10.1 (15aa) 6.8 (10aa) 8.1 (12aa) 4.7 (7aa) 0 (0aa) 2 (3aa) 4.7 (7aa) 5.4 (8aa) 6.1 (9aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.8 (10aa) 0 (0aa) 4.7 (7aa) 5.4 (8aa) 1.4 (2aa) 3.4 (5aa) 0.7 (1aa) 4.7 (7aa) 5.4 (8aa) 10.1 (15aa)

>BBR47_23950 anti-sigma-F factor
ATGGTACAGCGTAACTTTATGTCAGTGTCGTTTGCAGCATTGAGCCAAAATGAAGCATTC
GCACGTGTAGCGGTTGCAGCCTTCATTTCGCAACTCGATATTACGATGGACGAGCTGGAA
GAAATCAAAACCGTTATATCCGAGGCTGTTACGAATGCCATTATCCATGGTTATGACGAA
AATCCAGAGGGTGTGGTACAGATCTCTGTGCGAATTCAAGAGGACAGCATTGATCTGATT
GTGGAAGACAATGGACGTGGAATTGAGGATGTGGAGCAGGCTATGCAGCCACTCTATACG
ACGAAACCGGAGCTTGAGCGCTCTGGGATGGGCTTTACGATTATGGAGAATTTCATGGAT
TCTTTGGAAGTGGCAACGGTTGTGGGTAAGGGAACAACTGTCCGCCTCACCAAACGCCTG
GCGTTTGCCAAAGCCTTGCAAAATTAG


>BBR47_23950 anti-sigma-F factor
MVQRNFMSVSFAALSQNEAFARVAVAAFISQLDITMDELEEIKTVISEAVTNAIIHGYDE
NPEGVVQISVRIQEDSIDLIVEDNGRGIEDVEQAMQPLYTTKPELERSGMGFTIMENFMD
SLEVATVVGKGTTVRLTKRLAFAKALQN

NBRC No.	clone name	start	stop	length(bp)
G10-001-090	BB1FE1L10033G12	2,462,723	2,500,810	38,088

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.