CDS Information : BBR47_45640

Display	1000bp 10000bp 100000bp Clone

Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	4,829,949 / 4,828,756 / -
Location	complement(4828756..4829949)
Type	CDS
Length	1,194 bp (397 aa)

Product	putative oxidoreductase
Gene name
Functional category	Similar to unknown proteins - Homologous to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR006076 Uniprot:O31616 Pubmed:9827558,11744710

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-159 Q81CD6_BACCR Sarcosine oxidase beta subunit Alignment 2 E=1e-159 Q6HHQ6_BACHK Sarcosine oxidase, beta subunit Alignment 3 E=1e-159 Q63AB8_BACCZ Sarcosine oxidase, beta subunit Alignment 4 E=1e-159 A9VII0_9BACI FAD dependent oxidoreductase Alignment 5 E=1e-159 A3I9D8_9BACI Sarcosine oxidase, beta subunit Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase (Domain) PR01001   FADG3PDH IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase (Family) PR01001   FADG3PDH IPR006076 FAD dependent oxidoreductase (Domain) PF01266   DAO IPR006076 FAD dependent oxidoreductase (Family) PF01266   DAO IPR006231 Malate:quinone-oxidoreductase (Family) PTHR13847:SF14   FAD OXIDOREDUCTASE
SignalP	No significant hit
TMHMM	Transmembrane 1
SOSUI	Transmembrane 1

size of protein	397 amino acids
molecular mass	43,497.11 Da
pI	6.25
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.3 (37aa) 8.1 (32aa) 8.3 (33aa) 7.1 (28aa) 4.3 (17aa) 0.8 (3aa) 4.3 (17aa) 3.3 (13aa) 9.3 (37aa) 5.3 (21aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.5 (22aa) 1.5 (6aa) 1.3 (5aa) 3.8 (15aa) 2.5 (10aa) 4.5 (18aa) 2.3 (9aa) 6.3 (25aa) 5.8 (23aa) 6.5 (26aa)

>BBR47_45640 putative oxidoreductase
ATGACAGTACAAACCCATGCGCAGATTGCAGTAATCGGCGGTGGTATCATCGGCGCGGCG
ATTGCATATTACGCTGCGAAGGCTGGATTGGATGTCGTTGTCCTGGAAAAAGGCGAGCTG
GCATCAGGGACGTCCTCACGCTGTGACGGGAATATTTTGGCGATCGACAAGGACCCCGGC
TTTGACAGTCAGATGTCCCTGAAAAGCCAGATGCTCGTTGATCAGCTAAGCCTGGAGCTG
GACCATACGTTTGAATATCGGGCACCGGGGAGTATTCTCGTCTGCGAATCAGAGGCTGAG
ATGGAAGCCGCTCATGAATGGGTGCGACGGCAAAAAGAAGCAGGCTTGCCGTTTCGGATG
CTGGATAGGGCGGATATTCGGCAGGAGTCGCCTTACTTTGCCGACGACTTACTGGGAGGC
TTGGAGTGCGCCACCGATTCTACCGTCAATCCGTACATGCTGACCTTTGCCCTGTTTGAA
GGAGCGAAAAAGCATGGAGCGAGGATCATGCGCCGTACTGAGGTCAAGTCGCTCAGATGC
GATCAGGCGACGGGAACGTTTCACATCGGGCTTGGTACAGGCAGCATGACAGCCAAGCAG
GTCGTCAATGCCGCGGGGGTGTGGGCGCCAGTCATTGGCAAAATGATCGGGGTGGATATT
CCGATCGTTCCGCGCAAAGGGCATTTGATCGTCGCCTCGAGACAGATGCCTGTCGGTGTG
CGAAAGGTGATGGAATTCGGCTATCTCATCTCGAAGTTTGGCGGCGTGCGACAAGTAGAC
GAGGAGACAGAGAAGTACGGAGTCGCGCTCGTATTTGAACCGACAGAAAGCCAAAACTTC
TTGATTGGCTCCAGTCGTCAGTTCGCAGGCTTTGATACACAGATTGACCTGAATGTCGTC
AGGTGCATGGCGAGAAGAGCACTGCGCTTTTATCCGAAGATCGCCGACTTCGCCATCATC
CGCACCTATTGTGGTTTGCGCCCGTGGACTGAGGATCACTTGCCGATTATTTCTCGCGTA
GAGGAAGTACCCGGTTACTTTATCGCGGCTGGTCATGAAGGAGATGGAATCAGTCTGGCT
GCCGTCACAGGCAAGCTGGTGTCCGAGATGCTAGTCGATCAGACAGACACCATCATTCCG
ACAGAGCCGTTGCGCTTGGATCGTTTTACGAAAAAAGGAGTGTTGCATCCATGA


>BBR47_45640 putative oxidoreductase
MTVQTHAQIAVIGGGIIGAAIAYYAAKAGLDVVVLEKGELASGTSSRCDGNILAIDKDPG
FDSQMSLKSQMLVDQLSLELDHTFEYRAPGSILVCESEAEMEAAHEWVRRQKEAGLPFRM
LDRADIRQESPYFADDLLGGLECATDSTVNPYMLTFALFEGAKKHGARIMRRTEVKSLRC
DQATGTFHIGLGTGSMTAKQVVNAAGVWAPVIGKMIGVDIPIVPRKGHLIVASRQMPVGV
RKVMEFGYLISKFGGVRQVDEETEKYGVALVFEPTESQNFLIGSSRQFAGFDTQIDLNVV
RCMARRALRFYPKIADFAIIRTYCGLRPWTEDHLPIISRVEEVPGYFIAAGHEGDGISLA
AVTGKLVSEMLVDQTDTIIPTEPLRLDRFTKKGVLHP

NBRC No.	clone name	start	stop	length(bp)
G10-001-177	BB1FE1L10032E10	4,794,503	4,837,451	42,949
G10-001-178	BB1FE1L10025B03	4,825,651	4,867,035	41,385

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.