CDS Information : BBR47_45840

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	4,852,482 / 4,852,970 / +
Location	4852482..4852970
Type	CDS
Length	489 bp (162 aa)

Product	putative queuosine biosynthesis protein
Gene name	queD
Functional category	Information pathways - RNA modification
EC number
Note	This ORF product does not have significant similarity to QueD in Bacillus subtilis.
KEGG pathway
Sequence feature
References	Uniprot:O31676 Pubmed:14660578,16411777

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-66 A9VKR9_9BACI Putative uncharacterized protein Alignment 2 E=1e-66 A0RBG2_BACAH 6-pyruvoyl tetrahydrobiopterin synthase Alignment 3 E=1e-66 B0AQD7_BACAN Putative 6-pyruvoyl tetrahydrobiopterin synthase Alignment 4 E=1e-66 Q4MSG6_BACCE 6-pyruvoyl tetrahydrobiopterin synthase, putative Alignment 5 E=1e-66 Q81TC6_BACAN 6-pyruvoyl tetrahydrobiopterin synthase, putative Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR007115 6-pyruvoyl tetrahydropterin synthase and hypothetical protein (Family) PF01242   PTPS PD004049   Q81TC6_BACAN_Q81TC6; PTHR12589   PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	162 amino acids
molecular mass	19,279.91 Da
pI	6.23
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 6.2 (10aa) 6.2 (10aa) 6.8 (11aa) 6.2 (10aa) 6.2 (10aa) 1.9 (3aa) 2.5 (4aa) 4.9 (8aa) 4.9 (8aa) 3.7 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.9 (8aa) 0.6 (1aa) 3.7 (6aa) 3.7 (6aa) 4.9 (8aa) 4.9 (8aa) 5.6 (9aa) 6.8 (11aa) 6.2 (10aa) 9.3 (15aa)

>BBR47_45840 putative queuosine biosynthesis protein
ATGAGCGCGAACTTTGATTTTCGTATCGTCGATCGCATGCAGGCACTGGGTACCCATATT
CAAAAATCACAGCTTCGCTACCATAACAAACGCGTTTTGGTAAGCAAGGAATTTACTTTT
GACGCTGCCCATCATCTGCACGCTTATGAAGGAAAGTGCAAAAACCTCCACGGCCATACG
TACACGGTCGTCTTTGGCATCAGTGGCTTTCCGGACGAGATCGGACTCGTGATCGATTTC
GGTGACATCAAGCAAATCTGGAAAGAGCACATCGAAATTTATTTGGATCATCGCTATCTG
AATGAAATGCTTCCTCCGATGAATACCACTGCTGAAAACATGGTCGTGTGGATTTTCGAA
GAGATGGAAAAGCAATTGCAGTCAGATGCCTACCGCGACCGCTACGACGGCGCTCGGGTG
GAGTTCGTTCGCCTGTTCGAGACACCGACCAGCTATGCCGAGGCAAGACGGGAGTGGATG
ATGGAATGA


>BBR47_45840 putative queuosine biosynthesis protein
MSANFDFRIVDRMQALGTHIQKSQLRYHNKRVLVSKEFTFDAAHHLHAYEGKCKNLHGHT
YTVVFGISGFPDEIGLVIDFGDIKQIWKEHIEIYLDHRYLNEMLPPMNTTAENMVVWIFE
EMEKQLQSDAYRDRYDGARVEFVRLFETPTSYAEARREWMME

NBRC No.	clone name	start	stop	length(bp)
G10-001-178	BB1FE1L10025B03	4,825,651	4,867,035	41,385
G10-001-179	BB1FE1L10030G10	4,832,311	4,869,598	37,288

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.