CDS Information : BBR47_53500

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	5,662,763 / 5,662,302 / -
Location	complement(5662302..5662763)
Type	CDS
Length	462 bp (153 aa)

Product	hypothetical protein
Gene name
Functional category	Similar to unknown proteins - Partially similar to unknown proteins
EC number
Note	This ORF is encoded by a putative prophage. Brevibacillus brevis 47 has two copies of the putative prophage; This ORF is identical to BBR47_29440. Containing an ATP dependent DNA ligase, central domain (IPR012310).
KEGG pathway
Sequence feature
References	Family/Domain:IPR012310

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=2e-23 A6CIW4_9BACI ATP-dependent DNA ligase Alignment 2 E=5e-22 Q5WE67_BACSK ATP-dependent DNA ligase Alignment 3 E=5e-16 Q65KH5_BACLD LigB DNA ligase,phage related Alignment 4 E=1e-13 O31917_BACSU DNA ligase Alignment 5 E=1e-13 O64130_BPSPC YoqV protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR000977 ATP-dependent DNA ligase (Family) PTHR10459   ATP-DEPENDENT DNA LIGASE FAMILY IPR008994 Nucleic acid-binding, OB-fold (Domain) SSF50249   Nucleic acid-binding proteins IPR012310 ATP dependent DNA ligase, central (Domain) PF01068   DNA_ligase_A_M
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	153 amino acids
molecular mass	17,482.08 Da
pI	10.2
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.5 (13aa) 7.8 (12aa) 3.9 (6aa) 7.8 (12aa) 3.3 (5aa) 2 (3aa) 3.3 (5aa) 3.3 (5aa) 9.8 (15aa) 2.6 (4aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.9 (9aa) 0 (0aa) 2.6 (4aa) 2.6 (4aa) 6.5 (10aa) 7.8 (12aa) 2 (3aa) 9.2 (14aa) 7.8 (12aa) 3.3 (5aa)

>BBR47_53500 hypothetical protein
GTGTCTGTCCGTGGCCGGGCAATAACGGATACCCCAACTATGAGCAAAATCGCGTACATT
GACGGACGAGGCGAGGATTTATGGGACGCAATTGTCGCAAGAAACATGGAGGGCATAGTC
GCAAAGCGTAAGGATGGGCGATACCATGCGGATAAACGTACAGACGATTTCACCAAGATC
ATCAACTATACGTATGTAGACGTCCAGATCGCAGGATACAGGAAAGGTGACTTTGGCTGG
TTAGCATACTATAACGGTCGACCTGCAGGTGTCATTGAGCACGGCGTGCCACGTACGCAT
AAGAAGGCGTTTTATGGAGTGGCGAAACAGTTAATAACTGGTGAAGATCGTGAGTATGTT
TATCTGCAGCCTCAAATTAAAGCACGCGTCAAAATGAGAAACTGGACAAAAAGCGGGATG
CTGCGCTCACCAGTATTCGTCGATTTTATTCTAGCTGGCTAG


>BBR47_53500 hypothetical protein
MSVRGRAITDTPTMSKIAYIDGRGEDLWDAIVARNMEGIVAKRKDGRYHADKRTDDFTKI
INYTYVDVQIAGYRKGDFGWLAYYNGRPAGVIEHGVPRTHKKAFYGVAKQLITGEDREYV
YLQPQIKARVKMRNWTKSGMLRSPVFVDFILAG

NBRC No.	clone name	start	stop	length(bp)
G10-001-211	BB1FE1L10013A09	5,662,272	5,698,666	36,395

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.