CDS Information : BBR47_55480

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	5,865,108 / 5,863,774 / -
Location	complement(5863774..5865108)
Type	CDS
Length	1,335 bp (444 aa)

Product	putrescine importer
Gene name	puuP
Functional category	Cell envelope and cellular processes - Transport/binding proteins and lipoproteins
EC number
Note	puuP in Escherichia coli.
KEGG pathway
Sequence feature
References	Uniprot:P76037 Pubmed:15590624,17222132

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-146 A9VKT3_9BACI Amino acid permease-associated region Alignment 2 E=1e-138 Q3Z144_SHISS Putative amino acid/amine transport protein Alignment 3 E=1e-138 PUUP_ECOLI Putrescine importer Alignment 4 E=1e-138 Q5H778_ECOLI Putrescine importer Alignment 5 E=1e-138 Q0T5A1_SHIF8 Putative amino acid/amine transport protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR002293 Amino acid/polyamine transporter I (Family) PIRSF006060   High-affinity amino acid transporter PTHR11785   AMINO ACID TRANSPORTER IPR004841 Amino acid permease-associated region (Domain) PF00324   AA_permease
SignalP	No significant hit
TMHMM	Transmembrane 12
SOSUI	Transmembrane 13

size of protein	444 amino acids
molecular mass	48,325.38 Da
pI	9.41
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.5 (42aa) 10.6 (47aa) 15.1 (67aa) 5.6 (25aa) 7.7 (34aa) 1.8 (8aa) 3.4 (15aa) 3.6 (16aa) 8.1 (36aa) 7.4 (33aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.2 (32aa) 0.2 (1aa) 2.5 (11aa) 1.8 (8aa) 3.6 (16aa) 3.2 (14aa) 0.9 (4aa) 2.9 (13aa) 2.7 (12aa) 2.3 (10aa)

>BBR47_55480 putrescine importer
GTGAACGGGAGAGCAGAACTAACACGTAGTTTGAAGTTGCGGCATATTGTCGTAATTGGA
CTGGGCTACATGGCCCCGATGGCCGTTTTTGACACCTTTGGCATTGTTTCTGGAGAAACG
GGGGGGCACGTTCCTGCTGCTTATGCAGTCACACTTCTTGCAATCCTGTTTACGGCAGCA
AGCTACGGAAAGATGGTACGGCTATTCCCTTCAGCAGGGACCGCGTATACGTATACGCAG
CAAACGATCCATCCGTATGCCGGATTTCTGGTAGGCTGGGCGTCCTTGCTGGATTATTTG
TTTTTACCGATGATTAACGCCTTGTTGACAGGGGTTTACCTATCATCCGTATTTCCTGAT
GTATCGACTGTATGGTGGATTATAGGATTCATTGTACTGGTGACGGGGTTAAACGTATTT
CGCGTAACAGTAACCGCATCCGTCAACTCGATTTTGGTGCTGTTTCAAGTCGTGGTCGTC
GTGCTGTTTGCGGGATTGGCAATCCGTGGTCTTACGCAAGGTGACGGGCTTGGGCAAGTA
TTCAACCTGCGACCATTTTTGTCACCGGATATGTCTGTCATTGCACTGCTTTCGGGTGCG
TCAATTCTTTGTTTTTCCTTCCTTGGCTTTGATGCAGTAACCACGCTCACGGAGGAAACC
GTCGATGCGAAAAAGACGATTCCTCGCGGGATTATGCTCGTAGCACTCGCGGGAGGAGCG
TTGTTTATTACGGCCTCATATTTCATGCAATCTTTATTTCCTGATGTTTCGGTATTATCT
GATCCAGAAGCTGCTTCAGCGGAGATTGCGTTGTTTATCGGCGGAACCGTTTTTCAATTG
GTGTTTTTGGCCGCCGCCTTGTCCTCAACGCTGGCTTCCGGGCTTGTATCCGTCACGAGT
GTCACCCGTTTGCTGTACGCAATGGGCAGAGACGGATTTTTGCCGAAGCGCTGGTTCGGT
TATGTACATCCGAAGCTGAGAACGCCCGTGCTTAACGTTTTGTTGGTAGGAGCGTTGATG
CTGTTTGCTTTGTACATGGATTTGCTAACCGCCACGTCCTTTATTAACTTTGGCGCACTG
ATCGCCTTTAGCTTTGTGAACATCAGCGTAATGGCGTACTATTTCCGCAAACAAAAGAAC
AAGTCTATCAAGGATTGGTGGGGCTTCGTGTTGTCACCACTCATCGGGACAACGTTCATC
GCCTTTTTGTGGGTCAACCTAGAAGCAACGTCCATGATGCTGGGCTTGCTATGGAGCTCT
GTCGGCCTGATCTATTTGTTGTATTTGGTGAAGGTCAAGAAAACCAATTTGGAAATGATG
AAATTTGAGGAGTAA


>BBR47_55480 putrescine importer
MNGRAELTRSLKLRHIVVIGLGYMAPMAVFDTFGIVSGETGGHVPAAYAVTLLAILFTAA
SYGKMVRLFPSAGTAYTYTQQTIHPYAGFLVGWASLLDYLFLPMINALLTGVYLSSVFPD
VSTVWWIIGFIVLVTGLNVFRVTVTASVNSILVLFQVVVVVLFAGLAIRGLTQGDGLGQV
FNLRPFLSPDMSVIALLSGASILCFSFLGFDAVTTLTEETVDAKKTIPRGIMLVALAGGA
LFITASYFMQSLFPDVSVLSDPEAASAEIALFIGGTVFQLVFLAAALSSTLASGLVSVTS
VTRLLYAMGRDGFLPKRWFGYVHPKLRTPVLNVLLVGALMLFALYMDLLTATSFINFGAL
IAFSFVNISVMAYYFRKQKNKSIKDWWGFVLSPLIGTTFIAFLWVNLEATSMMLGLLWSS
VGLIYLLYLVKVKKTNLEMMKFEE

NBRC No.	clone name	start	stop	length(bp)
G10-001-217	BB1FE1L10024F04	5,842,375	5,886,637	44,263

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.