CDS Information : BBR47_55530

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	5,869,904 / 5,871,892 / +
Location	5869904..5871892
Type	CDS
Length	1,989 bp (662 aa)

Product	probable methyl-accepting chemotaxis protein
Gene name
Functional category	Cell envelope and cellular processes - Mobility and chemotaxis
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:P39214 Pubmed:8188684 Uniprot:P39215 Pubmed:8188684 Uniprot:P39216 Pubmed:8188684 Uniprot:P39217 Pubmed:8188684

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-128 Q9K617_BACHD Methyl-accepting chemotaxis protein Alignment 2 E=1e-128 Q9Z9T0_BACHD Metyl-accepting chemotaxis protein Alignment 3 E=1e-105 A1HQT2_9FIRM Methyl-accepting chemotaxis sensory transducer precursor Alignment 4 E=7e-93 Q5L0E0_GEOKA Methyl-accepting chemotaxis protein Alignment 5 E=1e-91 A1HQA5_9FIRM Methyl-accepting chemotaxis sensory transducer precursor Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR003660 Histidine kinase, HAMP region (Domain) SM00304   no description PF00672   HAMP PS50885   HAMP IPR004010 Cache (Domain) PF02743   Cache_1 IPR004089 Bacterial chemotaxis sensory transducer (Domain) PS50111   CHEMOTAXIS_TRANSDUC_2 SM00283   no description PF00015   MCPsignal
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 1
SOSUI	Transmembrane 2

size of protein	662 amino acids
molecular mass	71,223.64 Da
pI	4.57
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.6 (70aa) 10.3 (68aa) 7.3 (48aa) 8 (53aa) 2.9 (19aa) 0.2 (1aa) 2.1 (14aa) 2 (13aa) 5.1 (34aa) 10 (66aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.3 (48aa) 0 (0aa) 4.5 (30aa) 7.9 (52aa) 2 (13aa) 5.4 (36aa) 0.6 (4aa) 2.7 (18aa) 4.2 (28aa) 7.1 (47aa)

>BBR47_55530 probable methyl-accepting chemotaxis protein
ATGTTTTTGTTCAACAAACTCAGGAACAAAATGATTCTTTGGTTTCTCGTCGTGGCCGTC
ATTCCACTTACTGCCGTTTCGTTGTTTATCACGAGCAGCTTTTCATCCATTCTCATTGAT
AAACAAAAATCATCCTATGTTGACCTTACTTCCAGTACAGCCATAGCGATGGATCAATAT
CTGGACCGGCGTATGACAGAAATTCAAATTTTAGCCCGCACCTCGGATATTCAATCCGAT
GATGCAGCAGCAAAAAATGAATTTATTCGCAAGTTTACCGAGGAAATGAAGCTGTATGAC
GGAAACACGTTTATCGCAAGCGATGGAAAAGTAACGGCTGATACGTTCCCCAAAAGCGTT
GGAATCAATCTTGGCGAGCGCCAATTCTTCAAAGACGGTATGCAGGACAAGCCCAGCTTC
TCCGATGTTCTTGTTGCGAAGACAACCGGCAATCGCTCTATCATCGTCGCTTCCCCTGTA
AAAGGGAAAAACAACGAGAAGCTTGGTGTCTTGACCGGGCTCGTCAATGTAGATGACTTC
ACAGCTACCTTTCTCAAAGATTTGAAAGTAGGCAACGATGGTTATCCGATTCTCGTTGAT
AACAAGAACCAAATTCAGTACCACCCTACCCAGGATCTGATCGGAAAACCGCTTGCGGAA
TCCGCTCTGCCGCAACCATTAACGGAAATCCTTCAATCAGGAAAAACAGAAAAGGGCTCA
TACAGCTACTCGGACAATGGCAAGGAATACGTTGTCACCTACTCCCCCATTCCCAAGACC
AACTTTGGTTTATATCTGCATATCCCTGTTGAATCTATAACGTCTGCGGTTTCATCCGTT
ACCACCATGGTCAGGATCATTGTCATCGTTGTTGTTGCTGTCGTGACCGCAATCGCCTAC
GCTGTTTCCCGGCAAATTTCACGCCCTATTGCAGCAGTTGCCTCCGTGGCTAACCGCATT
TCCGAGGGTGAACTGACTGTACAACCCTTGCAAATTCGAACCAAGGATGAGGTTGGACAG
TTATCCCAATCAGTAAACACAATGGTGCTCAACCTGCGAACGATTATTCAACAAGTGAAT
GATACAGCCTCAGATCTTGCTTCTTCCGCAGAGGAATTGTCGGTCAACGCCGACCATACG
AGCAAGGCTACCGAGCAAATCGCCATAACGATTCAGGAAGTAGCTTACGGTGCGGAAAAA
CAAGTGAAGAGTGTAGAGGAAAGTGTCACCGCAATTCAAGGCGTATCGACAGGGGCTCAG
CAGGTTGCCACGAATGCACAGCAAGCTGCTGAATCGGCTATGGGCGCTTCCCAAATTGCA
GTGGAAGGCAATCAGGCCCTTCAGGTCGTTATCAGCCAGATGCAATCGATCGAGAACACT
GTCGGCAACATTGCTGATATCGTCAAACGATTAGGAAACAGCTCGCAGGAAATCGGACAA
ATCGTACAAGTCATCACCGCCATTGCTGAACAAACAAATCTGTTAGCGCTAAACGCAGCG
ATTGAAGCGGCGAGAGCTGGTGAACAAGGTCGCGGTTTCGCCGTTGTAGCAGACGAAGTG
CGCAAATTGGCTGAGCAGTCCGCGGAATCCGCTCAACAGATTAAACTATTGATTACGACG
ATTCAGCTCGAATCAAACCAGGCTGTCCTTTCGATGGAACAAGGCACCAAAGAGGTCGCC
ACTGGACTTACGGTCGTTAACAATGCAGGCAAGTCCTTCGAACAGATCCAAGATGCTGTC
ACGCAGGTGGCAAGCCAAATCCAAGAAGTAAAGGCTTATTCTGAGCAAATGTCTTTTGGC
ACCAAACAGGTGGTAGAGTTGGTTAGTGTCATCGAAGAAGTAGCGGAGAATTCTGCTGAC
GGAACACAAAGCGTATCGGCCGCCACAGAAGAACAGCTGGCAGCTATGGAAGAAGTCAGT
TCATCATCAACTTCTTTGGCAAGAATAGCCGAAGAACTGCAATCTCATGTAAGCAAATTC
AAGATATAG


>BBR47_55530 probable methyl-accepting chemotaxis protein
MFLFNKLRNKMILWFLVVAVIPLTAVSLFITSSFSSILIDKQKSSYVDLTSSTAIAMDQY
LDRRMTEIQILARTSDIQSDDAAAKNEFIRKFTEEMKLYDGNTFIASDGKVTADTFPKSV
GINLGERQFFKDGMQDKPSFSDVLVAKTTGNRSIIVASPVKGKNNEKLGVLTGLVNVDDF
TATFLKDLKVGNDGYPILVDNKNQIQYHPTQDLIGKPLAESALPQPLTEILQSGKTEKGS
YSYSDNGKEYVVTYSPIPKTNFGLYLHIPVESITSAVSSVTTMVRIIVIVVVAVVTAIAY
AVSRQISRPIAAVASVANRISEGELTVQPLQIRTKDEVGQLSQSVNTMVLNLRTIIQQVN
DTASDLASSAEELSVNADHTSKATEQIAITIQEVAYGAEKQVKSVEESVTAIQGVSTGAQ
QVATNAQQAAESAMGASQIAVEGNQALQVVISQMQSIENTVGNIADIVKRLGNSSQEIGQ
IVQVITAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEQSAESAQQIKLLITT
IQLESNQAVLSMEQGTKEVATGLTVVNNAGKSFEQIQDAVTQVASQIQEVKAYSEQMSFG
TKQVVELVSVIEEVAENSADGTQSVSAATEEQLAAMEEVSSSSTSLARIAEELQSHVSKF
KI

NBRC No.	clone name	start	stop	length(bp)
G10-001-217	BB1FE1L10024F04	5,842,375	5,886,637	44,263

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.