CDS Information : BBR47_55600

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	5,878,189 / 5,877,590 / -
Location	complement(5877590..5878189)
Type	CDS
Length	600 bp (199 aa)

Product	probable glycerol uptake operon antiterminator regulatory protein
Gene name
Functional category	Information pathways - RNA synthesis - - Regulation
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:P30300 Pubmed:11929549,8012593

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=6e-34 Q2B380_9BACI Glycerol uptake operon antiterminator regulatory protein Alignment 2 E=3e-33 A0Q377_CLONN Glycerol uptake operon antiterminator regulatory protein Alignment 3 E=4e-33 Q8EMX0_OCEIH Transcriptional antiterminator of glycerol uptake operon Alignment 4 E=3e-32 Q8R8J3_THETN Glycerol-3-phosphate responsive antiterminator MRNA-binding Alignment 5 E=2e-31 Q2AIJ6_9FIRM Glycerol-3-phosphate responsive antiterminator Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR006699 Glycerol-3-phosphate responsive antiterminator (Family) G3DSA:3.20.20.400   no description PF04309   G3P_antiterm SSF110391   GlpP-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	199 amino acids
molecular mass	21,962.57 Da
pI	9.39
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7.5 (15aa) 8 (16aa) 12.1 (24aa) 8.5 (17aa) 3.5 (7aa) 0.5 (1aa) 3.5 (7aa) 1.5 (3aa) 7.5 (15aa) 7 (14aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4 (8aa) 0.5 (1aa) 3 (6aa) 3.5 (7aa) 2 (4aa) 8 (16aa) 2.5 (5aa) 5 (10aa) 4.5 (9aa) 7 (14aa)

>BBR47_55600 probable glycerol uptake operon antiterminator regulatory protein
GTGAACCGGGAACAGTTTCGTGCAAGACTGGCACAGTACAAGCTAATCGCTTCTGTAAAA
GAAGCGAAGCACCTGGAAAAAGCGGCAGAGGCAAATTTGAGTGCTGCGGTACTCTCGATT
GGCAACATTGGTGTGATTAAAGGCTACGTGGATTATTTTAAGGCGAAAAATATCCCTGTA
TTTCTTCATTTGGAGCGGATTGGCGGAATCAGTCATGACAGGGAAGGCATTGCATTTCTG
GGGCATTACGTTAAGCCAGACGGGATCGTCACTACGCGCAACACACTGGTCAAGCTGGCG
AAAAAGCAAGGCCTACTGACGATTCAGCGTTTGTTTTTGGTTGATAGCGACTCGATTAAA
TCAGGCCTAACCTCCCTGCAAGATACACAGCCTGACGCTGTTGAGCTGATGCCTGGTTTG
CTGCCAGAGTTTATCGAAGAATTTCGAAGTGTGATCGATACCCCGATCATTTCTGGCGGG
CTAATTCGCAAGCGGGAACAGATGGAGGAAGTATTAAAGCATGGAGCGACAGCTGTTTCA
GTCGGAAGTCCCCTGCTGTGGAAGGAGTGTAAGAACCTTGATTCAAGCGTTGTTATTTGA


>BBR47_55600 probable glycerol uptake operon antiterminator regulatory protein
MNREQFRARLAQYKLIASVKEAKHLEKAAEANLSAAVLSIGNIGVIKGYVDYFKAKNIPV
FLHLERIGGISHDREGIAFLGHYVKPDGIVTTRNTLVKLAKKQGLLTIQRLFLVDSDSIK
SGLTSLQDTQPDAVELMPGLLPEFIEEFRSVIDTPIISGGLIRKREQMEEVLKHGATAVS
VGSPLLWKECKNLDSSVVI

NBRC No.	clone name	start	stop	length(bp)
G10-001-217	BB1FE1L10024F04	5,842,375	5,886,637	44,263
G10-001-218	BB1FE1L11001H10	5,873,944	5,911,674	37,731

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.