CDS Information : BBR47_55610

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	5,879,825 / 5,878,638 / -
Location	complement(5878638..5879825)
Type	CDS
Length	1,188 bp (395 aa)

Product	putative transporter
Gene name
Functional category	Cell envelope and cellular processes - Transport/binding proteins and lipoproteins
EC number
Note	Similar to the major facilitator superfamily MFS-1 (IPR011701).
KEGG pathway
Sequence feature
References	Family/Domain:IPR011701

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=1e-121 Q65P40_BACLD YbcL Probable transporter Alignment 2 E=1e-120 O34663_BACSU YbcL protein Alignment 3 E=1e-117 A7Z5E1_BACA2 YbcL Alignment 4 E=1e-113 Q5WI85_BACSK Major facilitator (MFS) superfamily protein Alignment 5 E=1e-113 Q5WKD1_BACSK Chloramphenicol resistance protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR007114 Major facilitator superfamily (Family) PS50850   MFS IPR011701 Major facilitator superfamily MFS-1 (Domain) PF07690   MFS_1 IPR011701 Major facilitator superfamily MFS_1 (Family) PF07690   MFS_1 IPR016196 Major facilitator superfamily, general substrate transporter (Domain) SSF103473   MFS general substrate transporter IPR020846 Major facilitator superfamily domain (Domain) PS50850   MFS
SignalP	No significant hit
TMHMM	Transmembrane 12
SOSUI	Transmembrane 11

size of protein	395 amino acids
molecular mass	41,734.26 Da
pI	10.17
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.9 (35aa) 9.1 (36aa) 14.7 (58aa) 12.7 (50aa) 4.6 (18aa) 1.8 (7aa) 3.3 (13aa) 3.5 (14aa) 10.9 (43aa) 8.6 (34aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.1 (24aa) 0 (0aa) 1.3 (5aa) 2.8 (11aa) 2.3 (9aa) 2.8 (11aa) 0.5 (2aa) 2.8 (11aa) 2 (8aa) 1.5 (6aa)

>BBR47_55610 putative transporter
ATGCTAAACTCATGGAAAATTTACATACTGGCCATCGTCAGTTTTTTGGTAGGGACATCT
GAATTTGTTATCGCTGGAATATTAGATAGGGTCGCAAGTGATGTCGGCGTGACGCTAGCA
GCAGCCGGGCAGCTCATCACTGTCTACTCGCTTGCATACGCGATCGGTACTCCAATTTTG
ATTGCAATCACCGCAAAAATGGACCGAAGAAAGCTCATGTTGGCTGCTTTGGTGCTATTT
CTTTTAGGAAATCTAGTCACGATTACAACGACTGGCTTCGCCATGTTGTTCGGAGCTAGA
ATTATTTTGGCGATTGGAACCGGTGTATTTATGGTGGTCGCTCTAACCGTTGCCTCTAAG
ATTGCTCAGCCGGGCAAGCAAGGCGGTGCGATTGCAACGGTTCTCTTAGGCTTTAATCTC
GCGCTTATTCTAGGTGTTCCTCTGGGGAGAGTTATTGCTGGTTCCTATGATTGGAAGATC
ATCTTTACGGGTATCGGAGTGCTCAGCCTGATCGCTATGTTTGTCCTTCTGCTGACCATT
CCCAAGTCTAAGGGCGAGATTCCAGTTCCCATACGGGAGCAGCTTTCCCTGCTTAAAACG
CCTCGAATCTCTATTGCCTTGTCCATTAGCTTTTTCTGGATTCTAGGTTATACGATCATT
TATACTTATATTTCTCCGTTCCTCCTGACCATTACTGGGATGAGCGACCGGATGGTCAGT
ATCGGGCTATTTGTATTCGGCATAGCCAGTCTTCTTGGTTCTCAGGTTGGCGGCTATGGC
GCAGATAAATGGGGGATTCCCCGTACTATGATTGGTGGCTTGCTTCTCCACTCCGGGATC
TTGCTACTAATAACAGTATTCTCCCATTCTTCCGTATTCGTGCTGCCTTTACTGATGTTG
TGGTCTTTTTTTGCTTGGTCGACTGGTCCGGTCCAACAAGTATATCTGATTGGTATGGCA
CCCAAAGCCTCCGGAATCATTCTGAGCTTGAACACTTCCATCGTACAATTGGGCATGGCC
GTTGGATCTGTAATTGGGGGCATGGTTGTAGAAAACATATCGCTTCAAGCCGTCGGTTGG
ATTGGCGCAATCGGTGTAGCGATTGCGCTCCTGCCAGCAGTGGTATCTTTATCCATGCGG
AGCCAATCTGATATTAGAGGACAAGAACTGTCTGAGACTATAGACTAA


>BBR47_55610 putative transporter
MLNSWKIYILAIVSFLVGTSEFVIAGILDRVASDVGVTLAAAGQLITVYSLAYAIGTPIL
IAITAKMDRRKLMLAALVLFLLGNLVTITTTGFAMLFGARIILAIGTGVFMVVALTVASK
IAQPGKQGGAIATVLLGFNLALILGVPLGRVIAGSYDWKIIFTGIGVLSLIAMFVLLLTI
PKSKGEIPVPIREQLSLLKTPRISIALSISFFWILGYTIIYTYISPFLLTITGMSDRMVS
IGLFVFGIASLLGSQVGGYGADKWGIPRTMIGGLLLHSGILLLITVFSHSSVFVLPLLML
WSFFAWSTGPVQQVYLIGMAPKASGIILSLNTSIVQLGMAVGSVIGGMVVENISLQAVGW
IGAIGVAIALLPAVVSLSMRSQSDIRGQELSETID

NBRC No.	clone name	start	stop	length(bp)
G10-001-217	BB1FE1L10024F04	5,842,375	5,886,637	44,263
G10-001-218	BB1FE1L11001H10	5,873,944	5,911,674	37,731

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.