CDS Information : BBR47_57980

Display	1000bp 10000bp 100000bp Clone

Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	6,142,450 / 6,143,226 / +
Location	6142450..6143226
Type	CDS
Length	777 bp (258 aa)

Product	glutamine ABC transporter substrate binding protein
Gene name	glnH
Functional category	Cell envelope and cellular processes - Transport/binding proteins and lipoproteins
EC number
Note	glnH in Escherichia coli.
KEGG pathway
Sequence feature
References	Uniprot:P0AEQ3 Pubmed:8831790

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=6e-78 Q2B3P4_9BACI Glutamine-binding periplasmic protein fused to glutamine permease Alignment 2 E=6e-76 A6LW21_CLOB8 Extracellular solute-binding protein, family 3 precursor Alignment 3 E=5e-72 Q97MT0_CLOAB Glutamine-binding periplasmic protein fused to glutamine permease Alignment 4 E=1e-70 Q41H12_9BACI Extracellular solute-binding protein, family 3 precursor Alignment 5 E=5e-61 Q837S0_ENTFA Amino acid ABC transporter, amino acid-binding/permease protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001320 Ionotropic glutamate receptor (Domain) SM00079   no description IPR001320 Ionotropic glutamate receptor (Family) SM00079   no description IPR001638 Extracellular solute-binding protein, family 3 (Domain) SM00062   no description PF00497   SBP_bac_3 IPR001638 Bacterial extracellular solute-binding protein, family 3 (Family) SM00062   no description PF00497   SBP_bac_3 IPR015683 Glutamate receptor-related (Family) PTHR18966   IONOTROPIC GLUTAMATE RECEPTOR-RELATED
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit
SOSUI	Transmembrane 1

size of protein	258 amino acids
molecular mass	27,962.80 Da
pI	4.91
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.9 (23aa) 6.2 (16aa) 7.4 (19aa) 8.1 (21aa) 3.9 (10aa) 0 (0aa) 3.1 (8aa) 1.6 (4aa) 9.7 (25aa) 5 (13aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.6 (17aa) 0.4 (1aa) 4.3 (11aa) 3.1 (8aa) 4.7 (12aa) 11.2 (29aa) 0.4 (1aa) 1.2 (3aa) 8.1 (21aa) 6.2 (16aa)

>BBR47_57980 glutamine ABC transporter substrate binding protein
ATGAAAAAACTAATGTTTGCTGTGGTTTCTGGTTTGTTGGCGCTTACAGTAAGTGCGTGT
GGCACTGGCACAGATCAGGCTGCCTCAACATCCGGTGCAAAAAAGTACGTGTTTGGTACA
GATGCAACATACCCACCCTTTGAGTTTGAAAAAGACGGAAAATACGTAGGAATTGACATC
GACCTGATCAATGCAATCGCCAAAGAAGAGGGCTTTGAGGTAGAAATTAAGCCGATGGAC
TTCAAAGGAATCATTCCGGCTGTTCAAGCGAAGCAATTGGACGGTGCCATTGCGGGGATT
AGCATCAATGATAAACGCAAAGAAATTTTAGATTTCTCTGAACCATACTATCAAGCAGGT
CTTTCCTTGGTCGTACGTGAGGACAACACAACGATCAATGGAGAGGCAGATTTGGCTGGC
AAAACGATTGCGATCAAAAAAGGCACGACTGGCGCGACCTTTGCTGATGAGCTCGGGCAA
AAGTACGGCGCGACTGTCAAATACTTCGACGATAGCCCTTCCATGTTCCAAGAGGTTCAA
AACGGCAATGCTGATGTAACCATCGAGGACTATCCGGTTATCTCTTATAAAATTACGGTA
GACCCTGCTTCCAAGCTGAAAATTGTAGGCGATCGTCTCAATGGAGACCATTACGGCATC
GCGGTTTTAAAAGGGAACAAAGAGCTGCAAGACAAACTCAACTCCGGTCTGAAGAAGCTG
AAAGAGAACGGGAAATACGACGAAATCATTAACACATACTTGAGCACGAAAAAGTAA


>BBR47_57980 glutamine ABC transporter substrate binding protein
MKKLMFAVVSGLLALTVSACGTGTDQAASTSGAKKYVFGTDATYPPFEFEKDGKYVGIDI
DLINAIAKEEGFEVEIKPMDFKGIIPAVQAKQLDGAIAGISINDKRKEILDFSEPYYQAG
LSLVVREDNTTINGEADLAGKTIAIKKGTTGATFADELGQKYGATVKYFDDSPSMFQEVQ
NGNADVTIEDYPVISYKITVDPASKLKIVGDRLNGDHYGIAVLKGNKELQDKLNSGLKKL
KENGKYDEIINTYLSTKK

NBRC No.	clone name	start	stop	length(bp)
G10-001-227	BB1FE1L10035C06	6,108,547	6,146,130	37,584
G10-001-228	BB1FE1L11002C09	6,134,759	6,173,262	38,504

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.