CDS Information : BBR47_58220

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Brevibacillus brevis NBRC 100599 chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Brevibacillus brevis NBRC 100599
Replicon	chromosome
Start / Stop / Direction	6,169,644 / 6,170,087 / +
Location	6169644..6170087
Type	CDS
Length	444 bp (147 aa)

Product	putative transcriptional regulator
Gene name
Functional category	Information pathways - RNA synthesis - - Regulation
EC number
Note	MarR family.
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:13.0 show BLAST table	1 E=2e-67 Y1936_BACCR Uncharacterized HTH-type transcriptional regulator BC_1936 Alignment 2 E=4e-67 Y1941_BACAN Uncharacterized HTH-type transcriptional regulator BA_1941/GBAA1941/BAS1801 Alignment 3 E=4e-67 Y1720_BACAH Uncharacterized HTH-type transcriptional regulator BALH_1720 Alignment 4 E=4e-67 Y1758_BACCZ Uncharacterized HTH-type transcriptional regulator BCE33L1758 Alignment 5 E=4e-67 Q4MMI4_BACCE Multiple antibiotic resistance protein MarR, putative Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR000835 Bacterial regulatory protein, MarR (Family) PS50995   HTH_MARR_2 PF01047   MarR SM00347   no description PR00598   HTHMARR IPR011991 Winged helix repressor DNA-binding (Domain) G3DSA:1.10.10.10   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	147 amino acids
molecular mass	17,162.69 Da
pI	7.68
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 3.4 (5aa) 6.1 (9aa) 12.2 (18aa) 4.1 (6aa) 5.4 (8aa) 1.4 (2aa) 2.7 (4aa) 3.4 (5aa) 3.4 (5aa) 8.2 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 8.8 (13aa) 0 (0aa) 2.7 (4aa) 8.8 (13aa) 2 (3aa) 7.5 (11aa) 1.4 (2aa) 5.4 (8aa) 2.7 (4aa) 10.2 (15aa)

>BBR47_58220 putative transcriptional regulator
ATGCGTAATAACACCATCGGCTCATTAATCTGGTTACGCTTGATGCGGTTTACCACCCAA
AGCAACCAGCTGTCAAATGAGTTTCTCAAACGCTTCGACTTAACAACAGCGCAATTCGAT
GTTCTGATGCAAATAAGCGTCTACCAGCCTCTCACCCAGTCGGAGTTAGCTGAGAAGGTA
ACCGTTACACAGGGTGGTATTTCCCGGATGCTCGTAAGACTTGAAAAAGAGGGCTACATT
GTACGCAAGCAGGATTGGAAAACGAAAACGATCAGCCTTACCGAAAAAGGGGAAGCCGTA
CTGGAACAAGCCTTTCCTGAACAACTAGCGTTTCAGTCGTCATTCTTTGATGAGGTACTA
AGTGAAGAAGAACAAAAAACGCTTTACTCCCTAATGACACGCGTCCATAAGCATAGCCAA
AAAAAGGAATTACCGCCTGAGTAA


>BBR47_58220 putative transcriptional regulator
MRNNTIGSLIWLRLMRFTTQSNQLSNEFLKRFDLTTAQFDVLMQISVYQPLTQSELAEKV
TVTQGGISRMLVRLEKEGYIVRKQDWKTKTISLTEKGEAVLEQAFPEQLAFQSSFFDEVL
SEEEQKTLYSLMTRVHKHSQKKELPPE

NBRC No.	clone name	start	stop	length(bp)
G10-001-228	BB1FE1L11002C09	6,134,759	6,173,262	38,504
G10-001-229	BB1FE1L10026A11	6,162,296	6,202,363	40,068

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.