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CDS Information : CE0027

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Corynebacterium efficiens YS-314T (= NBRC 100395T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Corynebacterium efficiens YS-314T (= NBRC 100395T)
Replicon chromosome
Start / Stop / Direction 28,720 / 29,256 / +
Location 28720..29256
Type CDS
Length 537 bp (178 aa)

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Product conserved hypothetical protein
Gene name
Functional category has Similarities
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ8FUJ1
INSDBAC16837.1 (DDBJ GenBank EMBL)
RefSeqNP_736637.1
GI25026583
GeneID1032156
UniParcUPI00000DDBBA

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-98Q8FUJ1_COREFPutative uncharacterized proteinAlignment
2E=7e-89C8NRS7_COREFPutative uncharacterized proteinAlignment
3E=1e-28D2KYB1_CORGLPutative uncharacterized proteinAlignment
4E=2e-16A4QI11_CORGBPutative uncharacterized proteinAlignment
5E=2e-16Q5KRA6_CORGLPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000835 Bacterial regulatory protein, MarR (Family)
 [35-172]  PS50995
PS50995   HTH_MARR_2
 [55-159]  3.00000067992871e-17 SM00347
SM00347   HTH_MARR
 [63-120]  1.7e-07 PF01047
PF01047   MarR
IPR011991 Winged helix repressor DNA-binding (Domain)
 [34-137]  1.09999909120792e-14 G3DSA:1.10.10.10
G3DSA:1.10.10.10   Wing_hlx_DNA_bd
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 178 amino acids
molecular mass 19,272.92 Da
pI 5.53
aa composition
AlaValLeuIlePheTrpProMetGlySer
15.7
(28aa)		10.7
(19aa)		9.6
(17aa)		3.4
(6aa)		2.2
(4aa)		1.1
(2aa)		3.4
(6aa)		3.4
(6aa)		5.1
(9aa)		4.5
(8aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.7
(12aa)		0.6
(1aa)		2.8
(5aa)		4.5
(8aa)		0.6
(1aa)		2.2
(4aa)		3.9
(7aa)		6.7
(12aa)		6.2
(11aa)		6.7
(12aa)

open this sectionSequence