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CDS Information : CE0216

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Corynebacterium efficiens YS-314T (= NBRC 100395T) chromosome

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Overview 
Genome

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Organism Corynebacterium efficiens YS-314T (= NBRC 100395T)
Replicon chromosome
Start / Stop / Direction 235,334 / 233,589 / -
Location complement(233589..235334)
Type CDS
Length 1,746 bp (581 aa)

close this sectionAnnotation

Product 2-isopropylmalate synthase
Gene name leuA
Functional category Annotated
EC number 2.3.3.13
Note
KEGG pathway
Sequence feature
References

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UniProtQ8FU05
INSDBAC17026.1 (DDBJ GenBank EMBL)
RefSeqNP_736826.1
GI25026772
GeneID1034891
UniParcUPI00000DDC74

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0C8NR86_COREF2-isopropylmalate synthaseAlignment
2E=0LEU1_COREF2-isopropylmalate synthase
Alpha-isopropylmalate synthase
Alpha-IPM synthase		Alignment
3E=0LEU1_CORGL2-isopropylmalate synthase
Alpha-isopropylmalate synthase
Alpha-IPM synthase		Alignment
4E=0LEU1_CORGB2-isopropylmalate synthase
Alpha-isopropylmalate synthase
Alpha-IPM synthase		Alignment
5E=0Q6NJX5_CORDI2-isopropylmalate synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000891 Pyruvate carboxyltransferase (Domain)
 [40-294]  9.80000000000012e-69 PF00682
PF00682   HMGL-like
 [32-306]  PS50991
PS50991   PYR_CT
IPR002034 Alpha-isopropylmalate/homocitrate synthase (Conserved_site)
 [242-255]  PS00816
PS00816   AIPM_HOMOCIT_SYNTH_2
 [39-55]  PS00815
PS00815   AIPM_HOMOCIT_SYNTH_1
IPR002034 Alpha-isopropylmalate/homocitrate synthase (Domain)
 [242-255]  PS00816
PS00816   AIPM_HOMOCIT_SYNTH_2
 [39-55]  PS00815
PS00815   AIPM_HOMOCIT_SYNTH_1
IPR002034 Alpha-isopropylmalate/homocitrate synthase (Family)
 [242-255]  PS00816
PS00816   AIPM_HOMOCIT_SYNTH_2
 [39-55]  PS00815
PS00815   AIPM_HOMOCIT_SYNTH_1
IPR005668 Yeast 2-isopropylmalate synthase (Family)
 [2-570]  TIGR00970
TIGR00970   leuA_yeast
IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (Domain)
 [438-569]  6.1e-29 PF08502
PF08502   LeuA_dimer
 [456-569]  4.4e-35 SSF110921
SSF110921   2-isopropylmalate_synth_dimer
IPR013785 Aldolase-type TIM barrel (Domain)
 [39-312]  3.59998852907816e-48 G3DSA:3.20.20.70
G3DSA:3.20.20.70   Aldolase_TIM
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 581 amino acids
molecular mass 64,687.79 Da
pI 4.5
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.1
(53aa)		9.5
(55aa)		6.7
(39aa)		5.9
(34aa)		2.8
(16aa)		1.5
(9aa)		4.6
(27aa)		2.8
(16aa)		6.4
(37aa)		5
(29aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.9
(34aa)		0.9
(5aa)		5
(29aa)		4.1
(24aa)		3.1
(18aa)		4
(23aa)		1.9
(11aa)		5.7
(33aa)		7.1
(41aa)		8.3
(48aa)

open this sectionSequence