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CDS Information : CE0593

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Corynebacterium efficiens YS-314T (= NBRC 100395T) chromosome

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Overview 
Genome

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Organism Corynebacterium efficiens YS-314T (= NBRC 100395T)
Replicon chromosome
Start / Stop / Direction 628,187 / 629,290 / +
Location 628187..629290
Type CDS
Length 1,104 bp (367 aa)

close this sectionAnnotation

Product alanine racemase
Gene name alr
Functional category Annotated
EC number 5.1.1.1
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0C8NMB3_COREFD-alanine racemaseAlignment
2E=0ALR_COREFAlanine racemaseAlignment
3E=1e-145ALR_CORGLAlanine racemaseAlignment
4E=1e-144ALR_CORGBAlanine racemaseAlignment
5E=1e-134C5VEV6_9CORYAlanine racemaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000821 Alanine racemase region (Domain)
 [2-364]  8.8e-87 TIGR00492
TIGR00492   alr: alanine racemase
 [26-42]  7e-61 PR00992 [62-80]  7e-61 PR00992 [122-134]  7e-61 PR00992 [156-167]  7e-61 PR00992 [199-226]  7e-61 PR00992 [253-268]  7e-61 PR00992 [270-285]  7e-61 PR00992 [291-308]  7e-61 PR00992 [345-358]  7e-61 PR00992
PR00992   ALARACEMASE
 [1-363]  30.807 MF_01201
MF_01201   ALR_MF_01201
IPR001608 Alanine racemase, N-terminal (Domain)
 [8-226]  4.8e-57 PF01168
PF01168   Ala_racemase_N
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain)
 [224-362]  4e-39 G3DSA:2.40.37.10
G3DSA:2.40.37.10   no description
 [230-362]  1.5e-51 SSF50621
SSF50621   Alanine racemase C-terminal domain-like
IPR011079 Alanine racemase, C-terminal (Domain)
 [237-362]  2.5e-36 PF00842
PF00842   Ala_racemase_C
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 367 amino acids
molecular mass 39,351.72 Da
pI 5.86
aa composition
AlaValLeuIlePheTrpProMetGlySer
13.4
(49aa)
9.3
(34aa)
8.2
(30aa)
4.9
(18aa)
2.2
(8aa)
1.6
(6aa)
5.7
(21aa)
2.5
(9aa)
9.3
(34aa)
2.5
(9aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.4
(27aa)
1.6
(6aa)
3
(11aa)
1.6
(6aa)
1.9
(7aa)
1.9
(7aa)
3.8
(14aa)
7.1
(26aa)
7.6
(28aa)
4.6
(17aa)

open this sectionSequence