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CDS Information : CE0905

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Corynebacterium efficiens YS-314T (= NBRC 100395T) chromosome

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Overview 
Genome

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Organism Corynebacterium efficiens YS-314T (= NBRC 100395T)
Replicon chromosome
Start / Stop / Direction 953,796 / 955,208 / +
Location 953796..955208
Type CDS
Length 1,413 bp (470 aa)

close this sectionAnnotation

Product citrate synthase
Gene name gltA
Functional category Annotated
EC number 2.3.3.1
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ8RQP3
INSDBAC17715.1 (DDBJ GenBank EMBL)
RefSeqNP_737515.1
GI25027461
GeneID1031947
UniParcUPI00000DCA26

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8RQP3_COREFCitrate synthaseAlignment
2E=0C8NNH7_COREFCitrate synthaseAlignment
3E=0A4QCH0_CORGBCitrate synthaseAlignment
4E=0CISY_CORGLCitrate synthaseAlignment
5E=0Q6NIJ0_CORDICitrate synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR002020 Citrate synthase (Family)
 [346-358]  PS00480
PS00480   CITRATE_SYNTHASE
 [88-452]  4.4e-131 PF00285
PF00285   Citrate_synt
 [207-220]  6e-52 PR00143 [261-276]  6e-52 PR00143 [283-311]  6e-52 PR00143 [339-359]  6e-52 PR00143 [401-417]  6e-52 PR00143 [421-435]  6e-52 PR00143
PR00143   CITRTSNTHASE
IPR010953 Citrate synthase I (Family)
 [54-464]  6.6e-190 TIGR01798
TIGR01798   cit_synth_I: citrate (Si)-synthase
IPR016141 Citrate synthase-like, core (Domain)
 [43-470]  2.6e-155 SSF48256
SSF48256   Citrate synthase
IPR016142 Citrate synthase-like, large alpha subdomain (Domain)
 [93-358]  1.2e-96 G3DSA:1.10.580.10
G3DSA:1.10.580.10   no description
IPR019810 Citrate synthase active site (Active_site)
 [346-358]  PS00480
PS00480   CITRATE_SYNTHASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 470 amino acids
molecular mass 52,366.41 Da
pI 5.14
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.4
(44aa)
4.9
(23aa)
9.8
(46aa)
6.2
(29aa)
4.3
(20aa)
0.2
(1aa)
5.1
(24aa)
3.4
(16aa)
7.9
(37aa)
4.5
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.1
(24aa)
0.2
(1aa)
5.1
(24aa)
2.3
(11aa)
4.5
(21aa)
4.9
(23aa)
2.8
(13aa)
5.5
(26aa)
7
(33aa)
7
(33aa)

open this sectionSequence