CDS Information : CE1077
open/close allGenomic map
| Annotated |
| has Similarities |
| has Motifs without Similarities |
| Other |
Location
| Organism |
Corynebacterium efficiens YS-314T (= NBRC 100395T) |
| Replicon |
chromosome |
| Start / Stop / Direction |
1,133,761 / 1,133,513 / - |
| Location |
complement(1133513..1133761) |
| Type |
CDS |
| Length |
249 bp (82 aa) |
Annotation
| Product |
putative exodeoxyribonuclease, small subunit |
| Gene name |
|
| Functional category |
Annotated |
| EC number |
|
| Note |
|
| KEGG pathway |
|
| Sequence feature |
|
| References |
|
Related links to external database
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:25.0
|
| IPR003761 Exonuclease VII, small subunit (Family) |  ![[18-82] 10.731 MF_00337](/dogan/img/G.gif "[18-82] 10.731 MF_00337")
| MF_00337 EX7S_MF_00337 | ![[20-82] 3.9e-18 TIGR01280](/dogan/img/T.gif "[20-82] 3.9e-18 TIGR01280")
| TIGR01280 xseB: exodeoxyribonuclease VII, small subuni | ![[5-82] 8.3e-11 PIRSF006488](/dogan/img/S.gif "[5-82] 8.3e-11 PIRSF006488")
| PIRSF006488 Exodeoxyribonuclease VII, small subunit | ![[24-75] 8.7e-16 PF02609](/dogan/img/H.gif "[24-75] 8.7e-16 PF02609")
| PF02609 Exonuc_VII_S | ![[23-64] 4e-17 PD028235](/dogan/img/D.gif "[23-64] 4e-17 PD028235")
| PD028235 Q8FQP2_COREF_Q8FQP2; |
|
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
82 amino acids |
| molecular mass |
9,138.14 Da |
| pI |
4.19 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
8.5
(7aa) | 6.1
(5aa) | 11
(9aa) | 3.7
(3aa) | 1.2
(1aa) | 1.2
(1aa) | 3.7
(3aa) | 2.4
(2aa) | 9.8
(8aa) | 7.3
(6aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
1.2
(1aa) | 1.2
(1aa) | 3.7
(3aa) | 4.9
(4aa) | 3.7
(3aa) | 2.4
(2aa) | 1.2
(1aa) | 7.3
(6aa) | 3.7
(3aa) | 15.9
(13aa) |
|
Sequence
>CE1077 putative exodeoxyribonuclease, small subunit
ATGACCAACCCCGATGTCATCGGATCCGGCGCCGGAAACTACGAGTTCGAGCCCGTTGAG
TCCCTGTCCTATGAGCAGGCCCGTGATGAGCTGGTGGAGATCGTCAAGATCCTCGAGCTC
GGCCAGATGGGCCTGGATGAATCCCTGAGGTACTGGGAACGCGGCGAGTCACTGGCACGC
CGATGCGAGGAACACCTCGCCGGCGCCTCCAAACGGGTGGAACAGGCGCTGGGCAACCAG
CCGGCCTGA
>CE1077 putative exodeoxyribonuclease, small subunit
MTNPDVIGSGAGNYEFEPVESLSYEQARDELVEIVKILELGQMGLDESLRYWERGESLAR
RCEEHLAGASKRVEQALGNQPA
