CDS Information : DEFDS_0030

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Deferribacter desulfuricans SSM1T (= NBRC 101012T) Chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Deferribacter desulfuricans SSM1T (= NBRC 101012T)
Replicon	Chromosome
Start / Stop / Direction	38,366 / 37,866 / -
Location	complement(37866..38366)
Type	CDS
Length	501 bp (166 aa)

Product	cobalt ABC transporter, permease
Gene name	cbiL
Functional category	Metabolism - [P] Inorganic ion transport and metabolism
EC number
Note	TC 3.A.1. The ATP-binding Cassette (ABC) Superfamily
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=7e-09 Q6AQ85_DESPS Putative uncharacterized protein Alignment 2 E=8e-09 B5YI80_THEYD Putative uncharacterized protein Alignment 3 E=4e-07 A4NFR4_HAEIN Putative uncharacterized protein Alignment 4 E=1e-06 A5UCL6_HAEIE Putative uncharacterized protein Alignment 5 E=1e-06 Q4QL58_HAEI8 Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	Transmembrane 2
SOSUI	No significant hit

size of protein	166 amino acids
molecular mass	18,994.21 Da
pI	9.31
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 3 (5aa) 3.6 (6aa) 9.6 (16aa) 12.7 (21aa) 6 (10aa) 0.6 (1aa) 1.8 (3aa) 3 (5aa) 6.6 (11aa) 7.8 (13aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (8aa) 1.2 (2aa) 7.8 (13aa) 0.6 (1aa) 3.6 (6aa) 11.4 (19aa) 1.8 (3aa) 2.4 (4aa) 2.4 (4aa) 9 (15aa)

>DEFDS_0030 cobalt ABC transporter, permease
ATGAAAAGGATCACTTTAATAACTTTAATTTTTCTATTTTCTTTAGTCAGTATAAGTTTT
GCACATAAACTAAACGTTTTCGCATATATAGAAAATGGTAAGATAAATATATCGTCATAT
TTTGTTGATGGCACTCCATGCAAAAATTGTACTATAACTCTTTACAAAAATAACAAAGAA
ATTTTTCGAGGTAAAACTAATAGTGAAGGGGAGTTATTAATAGAAAACAAATGGAATATG
CCAATTAAAATAACATCAGAAGAAAGTCTTGGGCATAAAGGTGAATTCGTATTAGAAGGT
GAACAAGTCAATGAAAACAAAGGATCTGAAGCTATTCACGATAATTATTCAAAAGATATT
AATCTATCAATTTCACGAAAAATGATAGAAGATATAGTCAAAGCTGAAATAGAAAAATCA
CTAAAACCTTATAAAATATATATGGGCATTGCAACCCTTTTAGGATTTTTTGGGATATTG
ATGCTTTTTAAAAAAAGATGA


>DEFDS_0030 cobalt ABC transporter, permease
MKRITLITLIFLFSLVSISFAHKLNVFAYIENGKINISSYFVDGTPCKNCTITLYKNNKE
IFRGKTNSEGELLIENKWNMPIKITSEESLGHKGEFVLEGEQVNENKGSEAIHDNYSKDI
NLSISRKMIEDIVKAEIEKSLKPYKIYMGIATLLGFFGILMLFKKR

NBRC No.	clone name	start	stop	length(bp)
G17-001-002	DD1FE11L00020A05	22,394	66,459	44,066

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.