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CDS Information : DMR_05400

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close this sectionGenomic map

Display Clone

Desulfovibrio magneticus RS-1 (= NBRC 104933) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Desulfovibrio magneticus RS-1 (= NBRC 104933)
Replicon chromosome
Start / Stop / Direction 603,469 / 605,466 / +
Location 603469..605466
Type CDS
Length 1,998 bp (665 aa)

close this sectionAnnotation

Product adenylylsulfate reductase alpha subunit
Gene name aprA
Functional category Metabolism
- Energy Metabolism
EC number 1.8.99.2
Note Belongs to the Adenylylsulfate reductase, alpha subunit family (IPR011803).
KEGG pathway map:00920 KO:K00394
Sequence feature
References Family/Domain:IPR011803
Uniprot:Q59339 Pubmed:8081492

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q72DT2_DESVHAdenylyl-sulphate reductase, alpha subunitAlignment
2E=0Q59339_DESVUAdenylyl-sulphate reductase alfa-subunitAlignment
3E=0A1VFD6_DESVVAdenylylsulfate reductase, alpha subunitAlignment
4E=0A6YCP1_9DELTAprAAlignment
5E=0Q9L767_DESDEAdenylylsulfate reductase alpha subunitAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR004112 Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (Domain)
 [525-665]  3.5e-34 SSF46977
SSF46977   Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
IPR011803 Adenylylsulfate reductase, alpha subunit (Family)
 [26-661]  TIGR02061
TIGR02061   aprA: adenylylsulfate reductase, alpha subu
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 665 amino acids
molecular mass 74,437.04 Da
pI 6.84
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.7
(58aa)
6.6
(44aa)
7.7
(51aa)
3.9
(26aa)
3.6
(24aa)
2.6
(17aa)
4.1
(27aa)
3.9
(26aa)
9.2
(61aa)
4.4
(29aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.6
(37aa)
2.7
(18aa)
3.8
(25aa)
2.6
(17aa)
4.1
(27aa)
6.5
(43aa)
2.6
(17aa)
5.3
(35aa)
6.2
(41aa)
6.3
(42aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G11-001-025 DM1GRC2E00013G11 583,739 624,941 41,203

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.