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CDS Information : DMR_39470

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close this sectionGenomic map

Display Clone

Desulfovibrio magneticus RS-1 (= NBRC 104933) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Desulfovibrio magneticus RS-1 (= NBRC 104933)
Replicon chromosome
Start / Stop / Direction 4,474,675 / 4,475,955 / +
Location 4474675..4475955
Type CDS
Length 1,281 bp (426 aa)

close this sectionAnnotation

Product putative sulfate adenylyltransferase
Gene name
Functional category Metabolism
- Energy Metabolism
EC number 2.7.7.4
Note Contains one ATP-sulfurylase domain (IPR002650).
KEGG pathway map:00920 KO:K00958
Sequence feature
References Family/Domain:IPR002650

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q30Z34_DESDGSulfate adenylyltransferaseAlignment
2E=0A1VEC2_DESVVSulfate adenylyltransferaseAlignment
3E=0Q72CI8_DESVHSulfate adenylyltransferaseAlignment
4E=0Q1NS31_9DELTSulfate adenylyltransferaseAlignment
5E=0A8ZWK4_DESOHSulfate adenylyltransferaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR002650 ATP-sulfurylase (Domain)
 [7-403]  7.9e-121 TIGR00339
TIGR00339   sopT: sulfate adenylyltransferase
 [73-409]  4.5e-146 PF01747
PF01747   ATP-sulfurylase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold (Domain)
 [207-410]  2.4e-73 G3DSA:3.40.50.620
G3DSA:3.40.50.620   no description
IPR015947 PUA-like (Domain)
 [4-184]  1.2e-45 SSF88697
SSF88697   PUA domain-like
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 426 amino acids
molecular mass 47,411.75 Da
pI 6.36
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.3
(31aa)
6.8
(29aa)
8.2
(35aa)
6.1
(26aa)
2.8
(12aa)
1.4
(6aa)
4.5
(19aa)
3.8
(16aa)
10.6
(45aa)
3.3
(14aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.5
(19aa)
2.1
(9aa)
1.6
(7aa)
1.6
(7aa)
4
(17aa)
9.4
(40aa)
2.3
(10aa)
4.5
(19aa)
6.3
(27aa)
8.9
(38aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G11-001-177 DM1GRC2E00028B11 4,463,476 4,498,670 35,195

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.