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CDS Information : GAU_0001

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close this sectionGenomic map

Display Clone

Gemmatimonas aurantiaca T-27T (= NBRC 100505T) chromosome

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close this sectionLocation

Organism Gemmatimonas aurantiaca T-27T (= NBRC 100505T)
Replicon chromosome
Start / Stop / Direction 101 / 1,519 / +
Location 101..1519
Type CDS
Length 1,419 bp (472 aa)

close this sectionAnnotation

Product chromosomal replication initiator protein DnaA
Gene name dnaA
Functional category Genetic Information Processing
- Replication and Repair
EC number
Note
KEGG pathway KO:K02313
Sequence feature
References HAMAP:MF_00377

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=1e-109A2U539_BACCOChromosomal replication initiator protein DnaAAlignment
2E=1e-108B2A2Y6_NATTJChromosomal replication initiator protein DnaAAlignment
3E=1e-107DNAA_BACP2Chromosomal replication initiator protein dnaAAlignment
4E=1e-107A6CPN1_9BACIChromosomal replication initiator protein dnaAAlignment
5E=1e-106DNAA_BACA2Chromosomal replication initiator protein dnaAAlignment
HAMAP
Database:HAMAP:20080521
 [6-462]  31.197 MF_00377
MF_00377   DNAA
InterPro
Database:interpro:18.0
IPR001957 Bacterial chromosomal replication initiator protein, DnaA (Family)
 [421-440]  PS01008
PS01008   DNAA
 [2-461]  8.6e-133 TIGR00362
TIGR00362   DnaA: chromosomal replication initiator pro
IPR003593 AAA+ ATPase, core (Domain)
 [149-280]  1.6e-08 SM00382
SM00382   no description
IPR010921 Trp repressor/replication initiator (Domain)
 [370-463]  1.5e-29 SSF48295
SSF48295   TrpR-like
IPR013159 Chromosomal replication initiator, DnaA C-terminal (Domain)
 [371-440]  6e-34 SM00760
SM00760   no description
 [371-440]  1.2e-32 PF08299
PF08299   Bac_DnaA_C
 [358-466]  9.5e-28 G3DSA:1.10.1750.10
G3DSA:1.10.1750.10   no description
IPR013317 Chromosomal replication initiator, DnaA (Domain)
 [117-337]  3.6e-127 PF00308
PF00308   Bac_DnaA
IPR018312 Chromosomal replication control, initiator DnaA, conserved site (Conserved_site)
 [421-440]  PS01008
PS01008   DNAA
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 472 amino acids
molecular mass 52,653.31 Da
pI 6.98
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.7
(46aa)
6.8
(32aa)
10.6
(50aa)
6.4
(30aa)
4.2
(20aa)
1.1
(5aa)
5.5
(26aa)
1.9
(9aa)
6.1
(29aa)
5.5
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.1
(29aa)
0.2
(1aa)
2.1
(10aa)
5.1
(24aa)
1.7
(8aa)
4
(19aa)
2.5
(12aa)
7.8
(37aa)
5.9
(28aa)
6.6
(31aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.