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CDS Information : GAU_0008

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close this sectionGenomic map

Display Clone

Gemmatimonas aurantiaca T-27T (= NBRC 100505T) chromosome

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Genome
Proteome 
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close this sectionLocation

Organism Gemmatimonas aurantiaca T-27T (= NBRC 100505T)
Replicon chromosome
Start / Stop / Direction 9,847 / 8,735 / -
Location complement(8735..9847)
Type CDS
Length 1,113 bp (370 aa)

close this sectionAnnotation

Product putative serine/threonine protein kinase
Gene name
Functional category Environmental Information and Cellular Processing
- Signal Transduction
EC number 2.7.11.1
Note
KEGG pathway
Sequence feature
References Uniprot:P33973 Pubmed:1835671

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=3e-49Q1D7H0_MYXXDSerine/threonine protein kinaseAlignment
2E=3e-49PKN3_MYXXASerine/threonine-protein kinase pkn3Alignment
3E=2e-45A9GKW5_SORC5Protein kinaseAlignment
4E=3e-45A8DJH2_9BACTSerine/threonine kinase PKN9Alignment
5E=4e-45Q08ZF7_STIAUSerine/threonine-protein kinase Pkn1Alignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR000719 Protein kinase (Domain)
 [57-305]  4e-36 PD000001
PD000001   PKN1_THETN_Q8R9T6;
 [57-320]  37.008 PS50011
PS50011   PROTEIN_KINASE_DOM
 [57-277]  2.5e-48 PF00069
PF00069   Pkinase
 [63-85]  PS00107
PS00107   PROTEIN_KINASE_ATP
IPR001245 Tyrosine protein kinase (Domain)
 [57-319]  1.9e-08 SM00219
SM00219   no description
IPR002290 Serine/threonine protein kinase (Domain)
 [57-320]  4.6e-56 SM00220
SM00220   no description
IPR008271 Serine/threonine protein kinase, active site (Active_site)
 [176-188]  PS00108
PS00108   PROTEIN_KINASE_ST
IPR011009 Protein kinase-like (Domain)
 [32-352]  6.9e-62 SSF56112
SSF56112   Protein kinase-like (PK-like)
IPR017441 Protein kinase, ATP binding site (Binding_site)
 [63-85]  PS00107
PS00107   PROTEIN_KINASE_ATP
IPR017441 Protein kinase ATP binding, conserved site (Conserved_site)
 [63-85]  PS00107
PS00107   PROTEIN_KINASE_ATP
IPR020636 Calcium/calmodulin-dependent protein kinase-like (Region)
 [104-321]  7.9e-40 PTHR22982
PTHR22982   CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 370 amino acids
molecular mass 39,408.01 Da
pI 8.41
aa composition
AlaValLeuIlePheTrpProMetGlySer
15.1
(56aa)
8.1
(30aa)
9.7
(36aa)
3.5
(13aa)
3
(11aa)
0.5
(2aa)
7.3
(27aa)
1.1
(4aa)
7.3
(27aa)
6.2
(23aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.9
(22aa)
0.8
(3aa)
1.6
(6aa)
4.6
(17aa)
3.5
(13aa)
4.6
(17aa)
1.6
(6aa)
5.7
(21aa)
4.6
(17aa)
5.1
(19aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.