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CDS Information : GAU_1936

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close this sectionGenomic map

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Gemmatimonas aurantiaca T-27T (= NBRC 100505T) chromosome

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close this sectionLocation

Organism Gemmatimonas aurantiaca T-27T (= NBRC 100505T)
Replicon chromosome
Start / Stop / Direction 2,263,437 / 2,261,749 / -
Location complement(2261749..2263437)
Type CDS
Length 1,689 bp (562 aa)

close this sectionAnnotation

Product urocanate hydratase
Synonym: urocanase
Synonym: imidazolonepropionate hydrolase
Gene name hutU
Functional category Metabolism
- Amino Acid Metabolism
EC number 4.2.1.49
Note
KEGG pathway map:00340 KO:K01712
Sequence feature
References HAMAP:MF_00577

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q2Z0D1_9BACTUrocanaseAlignment
2E=0Q01W03_SOLUEUrocanate hydrataseAlignment
3E=0A9FH40_SORC5HutU proteinAlignment
4E=0HUTU_SYMTHUrocanate hydratase
Urocanase
Imidazolonepropionate hydrolase
Alignment
5E=0Q1ISU9_ACIBLUrocanate hydrataseAlignment
HAMAP
Database:HAMAP:20080521
 [13-561]  64.152 MF_00577
MF_00577   HUTU
InterPro
Database:interpro:18.0
IPR000193 Urocanase (Family)
 [7-561]  PF01175
PF01175   Urocanase
 [9-562]  2.6e-250 SSF111326
SSF111326   Urocanase (Pfam 01175)
 [447-462]  PS01233
PS01233   UROCANASE
 [13-562]  PIRSF001423
PIRSF001423   Urocanate hydratase
 [15-559]  TIGR01228
TIGR01228   hutU: urocanate hydratase
 [88-432]  1e-129 PD025423
PD025423   HUTU_THETN_Q8RCH9;
IPR023636 Urocanase conserved site (Conserved_site)
 [447-462]  PS01233
PS01233   UROCANASE
IPR023637 Urocanase domain (Domain)
 [9-562]  2.6e-250 SSF111326
SSF111326   Urocanase (Pfam 01175)
 [7-561]  PF01175
PF01175   Urocanase
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 562 amino acids
molecular mass 60,428.59 Da
pI 5.87
aa composition
AlaValLeuIlePheTrpProMetGlySer
14.2
(80aa)
7.3
(41aa)
9.4
(53aa)
4.8
(27aa)
2.8
(16aa)
2
(11aa)
4.3
(24aa)
2.5
(14aa)
10.3
(58aa)
4.8
(27aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.3
(30aa)
0.7
(4aa)
2.1
(12aa)
3.2
(18aa)
1.8
(10aa)
1.4
(8aa)
1.8
(10aa)
9.1
(51aa)
6.6
(37aa)
5.5
(31aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.