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CDS Information : GAU_3748

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close this sectionGenomic map

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Gemmatimonas aurantiaca T-27T (= NBRC 100505T) chromosome

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close this sectionLocation

Organism Gemmatimonas aurantiaca T-27T (= NBRC 100505T)
Replicon chromosome
Start / Stop / Direction 4,402,387 / 4,399,586 / -
Location complement(4399586..4402387)
Type CDS
Length 2,802 bp (933 aa)

close this sectionAnnotation

Product phosphoenolpyruvate carboxylase
Gene name ppc
Functional category Metabolism
- Carbohydrate Metabolism
EC number 4.1.1.31
Note
KEGG pathway map:00620 KO:K01595
map:00720 KO:K01595
map:00710 KO:K01595
Sequence feature
References HAMAP:MF_00595

close this sectionComputational search results

BLASTP
Database:UniProtKB:14.0
1E=0Q47F75_DECARPhosphoenolpyruvate carboxylaseAlignment
2E=0CAPP_AZOSEPhosphoenolpyruvate carboxylase
PEPCase
PEPC
Alignment
3E=0CAPP_AZOSBPhosphoenolpyruvate carboxylase
PEPCase
PEPC
Alignment
4E=0B1DUP3_9RHOOPhosphoenolpyruvate carboxylaseAlignment
5E=0CAPP_RHOPAPhosphoenolpyruvate carboxylase
PEPCase
PEPC
Alignment
HAMAP
Database:HAMAP:20080521
 [14-933]  18.966 MF_00595
MF_00595   CAPP
InterPro
Database:interpro:18.0
IPR001449 Phosphoenolpyruvate carboxylase (Family)
 [581-593]  PS00393
PS00393   PEPCASE_2
 [153-164]  PS00781
PS00781   PEPCASE_1
 [5-933]  1.6e-90 PF00311
PF00311   PEPcase
IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core (Domain)
 [19-933]  3.7e-298 SSF51621
SSF51621   Phosphoenolpyruvate/pyruvate domain
 [174-689]  2.1e-128 G3DSA:3.20.20.60
G3DSA:3.20.20.60   no description
IPR018129 Phosphoenolpyruvate carboxylase, active site (Active_site)
 [153-164]  PS00781
PS00781   PEPCASE_1
 [581-593]  PS00393
PS00393   PEPCASE_2
IPR021135 Phosphoenolpyruvate carboxylase, C-terminal region (Region)
 [5-933]  1.6e-90 PF00311
PF00311   PEPcase
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 933 amino acids
molecular mass 103,266.53 Da
pI 6.42
aa composition
AlaValLeuIlePheTrpProMetGlySer
12
(112aa)
6.4
(60aa)
13.2
(123aa)
3.4
(32aa)
3.5
(33aa)
1.1
(10aa)
4.8
(45aa)
2
(19aa)
7.3
(68aa)
5
(47aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.2
(58aa)
0.4
(4aa)
1.7
(16aa)
4.8
(45aa)
2.5
(23aa)
0.9
(8aa)
2.5
(23aa)
10
(93aa)
6.1
(57aa)
6.1
(57aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.