CDS Information : KRH_00170

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	21,035 / 20,034 / -
Location	complement(20034..21035)
Type	CDS
Length	1,002 bp (333 aa)

Product	putative zinc-containing alcohol dehydrogenase
Gene name
Functional category	Metabolism - Others
EC number	1.1.1.-
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR013149

UniProt	B2GIX3
INSD	BAG28364.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733D96

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=4e-52 Q0RVY2_RHOSR Dehydrogenase Alignment 2 E=1e-18 O07737_MYCTU Possible DEHYDROGENASE Alignment 3 E=1e-18 Q4IW10_AZOVI Zinc-containing alcohol dehydrogenase superfamily Alignment 4 E=1e-18 A5U3R4_MYCTA Putative dehydrogenase Alignment 5 E=3e-18 A2VJ10_MYCTU Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR002085 Alcohol dehydrogenase superfamily, zinc-containing (Family) PTHR11695   ALCOHOL DEHYDROGENASE RELATED IPR011032 GroES-like (Domain) SSF50129   GroES-like IPR013149 Alcohol dehydrogenase, zinc-binding (Domain) PF00107   ADH_zinc_N IPR013154 Alcohol dehydrogenase GroES-like (Domain) PF08240   ADH_N IPR016040 NAD(P)-binding domain (Domain) G3DSA:3.40.50.720   no description SSF51735   NAD(P)-binding Rossmann-fold domains
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	333 amino acids
molecular mass	35,904.86 Da
pI	4.71
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.5 (35aa) 12.9 (43aa) 9.3 (31aa) 2.1 (7aa) 3.3 (11aa) 0.9 (3aa) 6.3 (21aa) 2.4 (8aa) 9.6 (32aa) 5.1 (17aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (16aa) 1.8 (6aa) 0.9 (3aa) 2.7 (9aa) 2.1 (7aa) 0.9 (3aa) 3 (10aa) 7.5 (25aa) 4.5 (15aa) 9.3 (31aa)

>KRH_00170 putative zinc-containing alcohol dehydrogenase
ATGCGCGCCACCCATGTCCCCACCAGCGGAAACGTGCTCGTGAAGCAGTGGCCCGATCCC
CGCGCCTCGCAGGACGGCCAGTTCGTGGTCCGGGTGGTGGCCGCGTCCGTGTGCGGCTCA
GACCTGCACTCGGTGCTGCACGGCACCCTGCACGAGCGGGCTCCCGAGCTCGCGGGCTAC
CCGGGGCACGAGGGCGTGGGTGTGGTCACGGAGTCCCGGTCGCCCAGGTTCCCCGTGGGC
ACGGCGGTGCTGTGCCTGCCCCCGGGTGAGCTCGGCGGCACCTTCGCGGAGCTCATGCTC
CTGGACGAGGAGCACGCGGTGGCGCTGCCGCCCGAGGCGGATCCAGAGGACCTCACGCAG
ATGCGCCGCTACATGATGGCGCAGCAGATGGGCACGTGCCTCTACGCCATGAACCTCTAC
TGGCCCACCGAGGTGCCGGCCCGGCGCGCGGGCACGTGCGTGGTCATGGGCGCGGGCTCC
GCGGGCCTCTTCTTCCTGCAGGACGCCCTCGCGCGCGGCTTCGAGCGGGTGGTGGTCTCC
GACAGGGAGGAGTCCCGCCTGGCCATCGCGCGCGAGCTGGGGGCCGTCACGGTCCGGGTG
CCGGAGGAGAGCCTGGCCGAGGTGGTCTCGGAGCTCACGGACGGCGCGGGTGCGGACCTC
GTGATCGAGGCCGTGGGATCGGACACCCTGCGCGCGGAGGCCGTGAACATCGTGGCCCAC
CGCGGCATCGTGGGCTGGTTCGGACTCTACGAGAGCTTCGACCCCGCCCCGGTGCCCGTC
TACGAGGTCTTCCGCAAGTGCGTGCGGCTGCAGGGTTCCGTGGCCGCCCAGTCCGAGCCC
GGGCTCATCTCGTTCCACGAGGCCGTGCGGCGCATCCACGCCGGGGAGGTCGAGGTCGAC
TACTGCCTCGGCCCCGTGCACACGCTCGAGGAGACCCTGGACGTCCTGCGGCGCGCGGAG
CGCGGCGGGGACGGTGAGGTGAAGTTCACGATCGTCCCGTGA


>KRH_00170 putative zinc-containing alcohol dehydrogenase
MRATHVPTSGNVLVKQWPDPRASQDGQFVVRVVAASVCGSDLHSVLHGTLHERAPELAGY
PGHEGVGVVTESRSPRFPVGTAVLCLPPGELGGTFAELMLLDEEHAVALPPEADPEDLTQ
MRRYMMAQQMGTCLYAMNLYWPTEVPARRAGTCVVMGAGSAGLFFLQDALARGFERVVVS
DREESRLAIARELGAVTVRVPEESLAEVVSELTDGAGADLVIEAVGSDTLRAEAVNIVAH
RGIVGWFGLYESFDPAPVPVYEVFRKCVRLQGSVAAQSEPGLISFHEAVRRIHAGEVEVD
YCLGPVHTLEETLDVLRRAERGGDGEVKFTIVP

NBRC No.	clone name	start	stop	length(bp)
G09-002-001	MDFO1S8501K15	2,744	37,820	35,077

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.