CDS Information : KRH_00220

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	27,932 / 28,756 / +
Location	27932..28756
Type	CDS
Length	825 bp (274 aa)

Product	hypothetical membrane protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

UniProt	B2GIX8
INSD	BAG28369.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733D9B

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=1e-19 Q8KRF5_9MICC Acid phosphatase Alignment 2 E=4e-16 A0AWD5_ARTS2 Phosphoesterase, PA-phosphatase related Alignment 3 E=6e-12 Q6NJR5_CORDI Putative membrane protein Alignment 4 E=1e-11 Q48DL1_PSE14 PAP2 superfamily protein/DedA family protein Alignment 5 E=7e-11 Q87VV4_PSESM PAP2 superfamily protein/DedA family protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR000326 Phosphoesterase, PA-phosphatase related (Family) SM00014   no description PF01569   PAP2 IPR008934 Acid phosphatase/vanadium-dependent haloperoxidase (Family) SSF48317   Acid phosphatase/Vanadium-dependent haloperoxidase IPR016118 Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (Domain) G3DSA:1.20.144.10   no description
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 6
SOSUI	Transmembrane 5

size of protein	274 amino acids
molecular mass	27,919.31 Da
pI	11.91
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 17.2 (47aa) 12.8 (35aa) 10.9 (30aa) 4.7 (13aa) 1.8 (5aa) 1.8 (5aa) 4.4 (12aa) 1.1 (3aa) 10.6 (29aa) 8 (22aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.6 (18aa) 0 (0aa) 1.1 (3aa) 2.9 (8aa) 0.7 (2aa) 0.4 (1aa) 2.9 (8aa) 7.3 (20aa) 2.9 (8aa) 1.8 (5aa)

>KRH_00220 hypothetical membrane protein
TTGCGTCACCGCGTAGCCGTTCCTCTGGTCGTGGTGCTGATGACGGCGACAATAGGACGT
CTGCTGGTGCTCTCACCGCAGGTGACCGACGGGGAGACCGCGTTGCTCGAGGGGCTCTCC
CAGCATCGCAACGTCCTTCTGGACACCATTGCCACGATCGTGCAGTTCGCGCTGTCCAAC
GGCGCTGTCGTGCTCATCATCGCGGCCGTCATCGGCTGGCTCGCCGTCATCCGGCGCCGC
CCCCTGGACGCCACGGGCTTCGGGATCACCGCCCTGGCCGGCTGGGGTGCCGTGGGGCTC
GTGAAGGTGGCCGTGGAACGCCCTCGGCCCGCACTCACGGGTGACCCCCTCAGCGTGGTC
ATCGGCAGCACGTCGTTCCCGTCGTCGCACACCGGAGCACTGGTGTCCATCGTCCTGGGT
CTCGCCCTCGTGGCCGCCACGGCGCGGTCCCGGCACAGCATCCTCCTGTGGGGGACCGTG
GGCGTGGTGCTGGTGGGCGCGGCCCGCATGTACTCCGGCGCCCACTACCCCCTGGACGTC
CTCGCTGCCCTGCCGGTGGCGTGGGCCGGGGTGATTGCGGGCGCGTCGCTCGCGAACATC
GTGGTGCCGGCCCTGGCCTTCGGATTCGGCTGGCAGCAGGCGGGGGTCTCCGTGGCCGCC
CGACGCACCGGTTCCACGGCCCCGACTCCTGCGCAGCACGCGGGCACCGTTCAGGCCTCC
CGTGCGGACGCGGCGGACTCCAGCGGATCGCACGGTGGCGCCGCACGCTCCGCGCAGCGC
ACCGGATCCTCCCGCGAGGAGCACCGGGTGGACCGCGCAGCCTGA


>KRH_00220 hypothetical membrane protein
MRHRVAVPLVVVLMTATIGRLLVLSPQVTDGETALLEGLSQHRNVLLDTIATIVQFALSN
GAVVLIIAAVIGWLAVIRRRPLDATGFGITALAGWGAVGLVKVAVERPRPALTGDPLSVV
IGSTSFPSSHTGALVSIVLGLALVAATARSRHSILLWGTVGVVLVGAARMYSGAHYPLDV
LAALPVAWAGVIAGASLANIVVPALAFGFGWQQAGVSVAARRTGSTAPTPAQHAGTVQAS
RADAADSSGSHGGAARSAQRTGSSREEHRVDRAA

NBRC No.	clone name	start	stop	length(bp)
G09-001-002	MDFO1S8502J22	24,628	62,283	37,656
G09-002-001	MDFO1S8501K15	2,744	37,820	35,077

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.