CDS Information : KRH_00230

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	29,512 / 29,102 / -
Location	complement(29102..29512)
Type	CDS
Length	411 bp (136 aa)

Product	hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

UniProt	B2GIX9
INSD	BAG28370.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733D9C

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=7e-22 A1SKY4_NOCSJ UspA domain protein Alignment 2 E=2e-21 A6W879_KINRA UspA domain protein Alignment 3 E=4e-20 A0JUR6_ARTS2 UspA domain protein Alignment 4 E=1e-17 A6W421_KINRA UspA domain protein Alignment 5 E=1e-17 A3TJR2_9MICO Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR006016 UspA (Domain) PF00582   Usp IPR014729 Rossmann-like alpha/beta/alpha sandwich fold (Domain) G3DSA:3.40.50.620   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	136 amino acids
molecular mass	14,634.67 Da
pI	5.62
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 13.2 (18aa) 10.3 (14aa) 10.3 (14aa) 2.9 (4aa) 0 (0aa) 0.7 (1aa) 6.6 (9aa) 2.2 (3aa) 8.1 (11aa) 2.2 (3aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 8.8 (12aa) 1.5 (2aa) 0.7 (1aa) 2.2 (3aa) 2.2 (3aa) 1.5 (2aa) 2.9 (4aa) 9.6 (13aa) 6.6 (9aa) 7.4 (10aa)

>KRH_00230 hypothetical protein
ATGAACATCGTCGTCGGTTACCTGCCCACGCCCGCCGGCCGCGCCGCGTTGCGCGCCGCC
ATGGACGAGGCGGCACTGCGCTCCGCCGGCCTCGTGGTGGTCCAGGGCCACCACACCAGG
CGCTGGGGCCGCCACACCGGCCCCGAGGAGACCGAGACCGCCGTGCGCGAGGACCGCGCC
GCCCTCGACGCTAGCGGTGTCCCGTACGAGCTCGTTCCCGTCGCGGACGACGCCGATCCC
GCGGACACCATCCTCGACGTCACCGACCGTGAGCACACCCAGCTGCTGGTCATCGGCACG
CGCAGGCGCACCCCGGTGGGCAAGCTCATCATGGCTCCCACCACCCAGCGCCTGCTGCTT
GAGGCCGGCTGCCCGGTGCTGTGCGTCAAGGAGGGCTACGAGTCCGCCTGA


>KRH_00230 hypothetical protein
MNIVVGYLPTPAGRAALRAAMDEAALRSAGLVVVQGHHTRRWGRHTGPEETETAVREDRA
ALDASGVPYELVPVADDADPADTILDVTDREHTQLLVIGTRRRTPVGKLIMAPTTQRLLL
EAGCPVLCVKEGYESA

NBRC No.	clone name	start	stop	length(bp)
G09-001-002	MDFO1S8502J22	24,628	62,283	37,656
G09-002-001	MDFO1S8501K15	2,744	37,820	35,077

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.