CDS Information : KRH_04460

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	485,358 / 486,605 / +
Location	485358..486605
Type	CDS
Length	1,248 bp (415 aa)

Product	putative MFS transporter
Gene name
Functional category	Environmental Information and Cellular Processing - Membrane Transport
EC number
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR011701

UniProt	B2GH41
INSD	BAG28793.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733F28

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=8e-80 Q1EMW0_STRCT Putative MFS permease Alignment 2 E=3e-73 Q0SAY6_RHOSR Probable multidrug resistance transporter, MFS superfamily protein Alignment 3 E=2e-62 Q0S8H0_RHOSR Probable multidrug resistance transporter, MFS superfamily protein Alignment 4 E=1e-61 A4FIB6_SACEN Probable multidrug resistance transporter, MFS superfamily Alignment 5 E=1e-60 Q5YQ45_NOCFA Putative transporter Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR011701 Major facilitator superfamily MFS-1 (Domain) PF07690   MFS_1 IPR011701 Major facilitator superfamily MFS_1 (Family) PF07690   MFS_1 IPR016196 Major facilitator superfamily, general substrate transporter (Domain) SSF103473   MFS general substrate transporter
SignalP	No significant hit
TMHMM	Transmembrane 12
SOSUI	Transmembrane 11

size of protein	415 amino acids
molecular mass	43,242.01 Da
pI	11.12
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 16.4 (68aa) 12.5 (52aa) 11.8 (49aa) 1.2 (5aa) 5.5 (23aa) 3.4 (14aa) 8 (33aa) 3.4 (14aa) 10.6 (44aa) 5.5 (23aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.7 (28aa) 0.7 (3aa) 0.5 (2aa) 1.7 (7aa) 1.7 (7aa) 0.2 (1aa) 1.2 (5aa) 5.8 (24aa) 1.2 (5aa) 1.9 (8aa)

>KRH_04460 putative MFS transporter
ATGGAGAATCCCGCCATGACGGCCGCCGCCCCGCGCACGTGGTGGCGGGTGGGCGCGGCC
ATGTTCACCGTGGGGTTCGGGGCCAACCTGTTCGCCCCCATGCTCGAGGTCTACCGCTCG
CAGGACGGGCTCAGCGAGTCCTTCGTGACCGGGATGCTGGGGATCTACGCCGCCGGGCTG
GTGCCCGCGCTGCTCGTGTTCGGGCCGGTGTCCGACCACCGGGGGCGGCGCGCCGTGATG
CGCCCGGCGCTCGTCGTGGTGATCGCGGCCTCCCTGGTGCTCGCCGCGGCGTCCCACACC
TCGGACTGGCTGCTGTACGCGGGCCGCTGGGTCATGGGCTTCGGGGTGGGCATGGCCATG
GCCTCGGGCTCCGCGTGGGTCAAGCAGCTCAGCACGGACCGCCCCGGCTCCGGACCCCGA
CGCGCCACCGTGGTGCTCTCCGCGGGATTCGGCGGGGGCCCGCTCGCCGCCGGACTGCTC
GCCCAGTTCCTGCCCGCACCGCAGGTCACGCCGTTCCTGCTGCACGTGCTGCTCGCGGGT
TGCGCTGCGGTGCTGGTGTGGCGCGTGCCCGAGACCCAGCCGCCCGCGAGCGGCCCGCGC
CCGTCCCGGCCGCTCGTGCCCGCCGTGGCGCGCACGGGCCGGTTCTTCTGGGTGGTGGCC
GCGTGGGCGCCGTGGGTGTTCGGCACGGCCACGATCGCGTTCGCGAGCATCCCGTCCTTC
CTGCTCACCACGGTGCGCTTCCCCGTGGCCTACCTCGGCGCGGTGGCCGCCACGGTGATG
TTCACCGGGGTGCTCGTGCAGCCCCTGGCGGCCCGGCTCGCGCGCAGCGGGTGGCTCCCC
CTGTCCGTCACGGGGCTCGGTGCCGCGAGCGCGGGCCTGGTCCTCGGGGCCCTGACCGTC
ACGTGGCACCTGAGCTGGCTCGCGTTCCCCACAGCCGTGATGCTGGGCGTGAGCTACGGG
TTCATGATGGTTGCCGGGCTGCGCGAGGTGGAGCTCATGGCCCGCCCGCACGAGCTCGGG
GCGCTGATCGGGGTGTTCTACACCCTCACCTACACGGGTTTCGCGGTGCCGTTCGTGCTG
TCCCTGGTGGCCCCGGCCGTGGCGCGCTGGGCCGGGGTGGAGCCCACCACGGGCTTCGTG
TGGTGCCTGCTTTTCGGCGTGCTGGTGTGCGCGGCCTCCGCGGTCCCTGTGGCACGCGCC
GCGGCACGCGGCGTTCCGGATCCGGGTACGACGACGCCGCAGGGCTGA


>KRH_04460 putative MFS transporter
MENPAMTAAAPRTWWRVGAAMFTVGFGANLFAPMLEVYRSQDGLSESFVTGMLGIYAAGL
VPALLVFGPVSDHRGRRAVMRPALVVVIAASLVLAAASHTSDWLLYAGRWVMGFGVGMAM
ASGSAWVKQLSTDRPGSGPRRATVVLSAGFGGGPLAAGLLAQFLPAPQVTPFLLHVLLAG
CAAVLVWRVPETQPPASGPRPSRPLVPAVARTGRFFWVVAAWAPWVFGTATIAFASIPSF
LLTTVRFPVAYLGAVAATVMFTGVLVQPLAARLARSGWLPLSVTGLGAASAGLVLGALTV
TWHLSWLAFPTAVMLGVSYGFMMVAGLREVELMARPHELGALIGVFYTLTYTGFAVPFVL
SLVAPAVARWAGVEPTTGFVWCLLFGVLVCAASAVPVARAAARGVPDPGTTTPQG

NBRC No.	clone name	start	stop	length(bp)
G09-001-022	MDFO1S8501D08	484,315	519,590	35,276
G09-002-014	MDFO1S8502J04	458,304	501,015	42,712

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.