CDS Information : KRH_04660

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	508,893 / 509,498 / +
Location	508893..509498
Type	CDS
Length	606 bp (201 aa)

Product	hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

UniProt	B2GH61
INSD	BAG28813.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733F9F

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=8e-25 A1R9X9_ARTAT Putative bacterial type II secretion system protein F domain Alignment 2 E=1e-23 A0K0C5_ARTS2 Type II secretion system protein precursor Alignment 3 E=9e-16 A7BAD4_9ACTO Putative uncharacterized protein Alignment 4 E=2e-15 A5U8Y0_MYCTA Putative conserved alanine rich membrane protein Alignment 5 E=6e-15 A1QXN6_MYCTF Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001992 Bacterial type II secretion system protein (Family) PF00482   GSPII_F IPR018076 Type II secretion system F domain (Domain) PF00482   GSPII_F
SignalP	No significant hit
TMHMM	Transmembrane 2
SOSUI	Transmembrane 2

size of protein	201 amino acids
molecular mass	20,980.43 Da
pI	9.83
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 20.4 (41aa) 6.5 (13aa) 15.4 (31aa) 1 (2aa) 3 (6aa) 2 (4aa) 7.5 (15aa) 2 (4aa) 9.5 (19aa) 6 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3 (6aa) 1.5 (3aa) 0 (0aa) 1.5 (3aa) 1.5 (3aa) 0.5 (1aa) 2 (4aa) 9.5 (19aa) 3 (6aa) 4.5 (9aa)

>KRH_04660 hypothetical protein
GTGATCGCCACCGTCCTCGCGGGCCTGCTCGCCGCCGGTGCCCTGCTGCTGTGGATGTCA
CGGGGCGCGTTCGGTGTCCGTTCACGCGGGCCGGGCCCACGACGCCGCGCGGCCGGCGGT
TCCGCCCTGCACCGTGCTCGTCCTGGGCCGGGGGAGCACTCGTTCCCCGCTCTGCCGGCC
GCCGCTCTCGTCGAGCTCACGGCGTGCCAGCTGGATGCCGGGCTGCCCCTCGTCGAAGCG
GTGGGGGTGCTGGCGGACAGCAGCGCGGGGCGCCCCTATCCGGCGCTCTCGCGGGCGGCC
GCCGCACTGCGTCTCGGCCTCTCGTGGGACGCCGCGTGGCCGGATCAGACGGCGTTGCCG
CACGAGATCCACGACTATCGGGACGCCCTGGAGTTCACGGCCACCTCCGCCACGGCGTCC
GCGTCCGTGCTGCGGGGTCAGGCGGAACTCGTGCGCCGCGCCGAGTACCGCCGCGCGGAA
CGGGCCGCGGAGGCCCTTGCGGTGAAGCTCGTGCTTCCCCTCGGCCTGTGCTTCCTGCCG
GCGTTCATGTGCTGGGGCGTGGTGCCCGTGCTCATGGGCCTGCTGCCCAGGGCGTTCGGC
TCATGA


>KRH_04660 hypothetical protein
MIATVLAGLLAAGALLLWMSRGAFGVRSRGPGPRRRAAGGSALHRARPGPGEHSFPALPA
AALVELTACQLDAGLPLVEAVGVLADSSAGRPYPALSRAAAALRLGLSWDAAWPDQTALP
HEIHDYRDALEFTATSATASASVLRGQAELVRRAEYRRAERAAEALAVKLVLPLGLCFLP
AFMCWGVVPVLMGLLPRAFGS

NBRC No.	clone name	start	stop	length(bp)
G09-001-022	MDFO1S8501D08	484,315	519,590	35,276
G09-002-015	MDFO1S8503K01	497,769	537,224	39,456

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.