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CDS Information : KRH_06770

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 734,439 / 736,517 / +
Location 734439..736517
Type CDS
Length 2,079 bp (692 aa)

close this sectionAnnotation

Product hypothetical membrane protein
Gene name
Functional category Unclassified
- hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtB2GJJ5
INSDBAG29024.1 (DDBJ GenBank EMBL)
UniParcUPI0001733E50

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-164A0JYY9_ARTS2Acyltransferase 3Alignment
2E=1e-160A1R8L5_ARTATAcyltransferase family domain proteinAlignment
3E=1e-154A1R7E2_ARTATPutative acyltransferase family domain proteinAlignment
4E=1e-147A1R8L6_ARTATAcyltransferase family domain proteinAlignment
5E=1e-141A0JYZ0_ARTS2Acyltransferase 3Alignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR002656 Acyltransferase 3 (Domain)
 [35-377]  2.2e-45 PF01757
PF01757   Acyl_transf_3
SignalP No significant hit
TMHMM
 [40-57]  Transmembrane (i-o) [61-80]  Transmembrane (o-i) [101-123]  Transmembrane (i-o) [166-188]  Transmembrane (o-i) [195-217]  Transmembrane (i-o) [232-251]  Transmembrane (o-i) [258-275]  Transmembrane (i-o) [285-307]  Transmembrane (o-i) [324-341]  Transmembrane (i-o) [351-370]  Transmembrane (o-i) [387-409]  Transmembrane (i-o)
Transmembrane 11   
SOSUI
 [39-61]  Transmembrane [64-86]  Transmembrane [101-123]  Transmembrane [131-153]  Transmembrane [167-188]  Transmembrane [196-218]  Transmembrane [257-279]  Transmembrane [282-304]  Transmembrane [321-342]  Transmembrane [350-372]  Transmembrane [386-406]  Transmembrane
Transmembrane 11   

close this sectionCalculated information (Amino acid sequence)

size of protein 692 amino acids
molecular mass 75,368.26 Da
pI 7.08
aa composition
AlaValLeuIlePheTrpProMetGlySer
11
(76aa)
11.6
(80aa)
12.3
(85aa)
3
(21aa)
4.2
(29aa)
3.2
(22aa)
6.5
(45aa)
1.6
(11aa)
8.4
(58aa)
6.2
(43aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.2
(29aa)
1.4
(10aa)
2.3
(16aa)
3.2
(22aa)
2.3
(16aa)
1.7
(12aa)
2.3
(16aa)
6.2
(43aa)
3.8
(26aa)
4.6
(32aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-018 MDFO1S8501C20 705,242 737,547 32,306
G09-002-019 MDFO1S8503P10 732,754 760,396 27,643

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.