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CDS Information : KRH_06820

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 740,999 / 742,597 / +
Location 740999..742597
Type CDS
Length 1,599 bp (532 aa)

close this sectionAnnotation

Product GMP synthetase
Synonym: glutamine amidotransferase
Gene name guaA
Functional category Metabolism
- Nucleotide Metabolism
EC number 6.3.5.2
Note
KEGG pathway map:00230 KO:K01951
Sequence feature
References HAMAP:MF_00344

close this sectionRelated links to external database

UniProtB2GJK0
INSDBAG29029.1 (DDBJ GenBank EMBL)
UniParcUPI0001733E55

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0A0JYX8_ARTS2GMP synthase
Glutamine-hydrolyzing		Alignment
2E=0A1R8K4_ARTATGMP synthase
Glutamine amidotransferase		Alignment
3E=0A5CU50_CLAM3GMP synthaseAlignment
4E=0A6W5Z9_KINRAGMP synthase, large subunitAlignment
5E=0GUAA_STRAWGMP synthase [glutamine-hydrolyzing]
Glutamine amidotransferase
GMP synthetase		Alignment
HAMAP
Database:HAMAP:20070519 
 [13-532]  53.022 MF_00344
MF_00344   GUAA
InterPro
Database:interpro:16.0
IPR000991 Glutamine amidotransferase class-I (Domain)
 [17-201]  3.7e-56 PF00117
PF00117   GATase
IPR001317 Carbamoyl-phosphate synthase, GATase region (Domain)
 [16-30]  1e-05 PR00099 [57-71]  1e-05 PR00099 [87-103]  1e-05 PR00099
PR00099   CPSGATASE
IPR001674 GMP synthase, C-terminal (Domain)
 [438-531]  3e-52 PF00958
PF00958   GMP_synt_C
 [212-532]  2.8e-211 TIGR00884
TIGR00884   guaA_Cterm: GMP synthase, C-terminal domain
IPR003694 NAD+ synthase (Domain)
 [213-253]  8.4e-05 PF02540
PF02540   NAD_synthase
IPR004739 GMP synthase, N-terminal (Domain)
 [16-205]  3.2e-104 TIGR00888
TIGR00888   guaA_Nterm: GMP synthase, N-terminal domain
IPR006220 Anthranilate synthase component II/delta crystallin (Domain)
 [60-69]  4.6e-05 PR00097 [87-98]  4.6e-05 PR00097 [177-190]  4.6e-05 PR00097
PR00097   ANTSNTHASEII
IPR011702 Glutamine amidotransferase superfamily (Domain)
 [60-69]  7.5e-07 PR00096 [87-98]  7.5e-07 PR00096 [177-190]  7.5e-07 PR00096
PR00096   GATASE
IPR012998 Glutamine amidotransferase, class I, active site (Active_site)
 [87-98]  PS00442
PS00442   GATASE_TYPE_I
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold (Domain)
 [207-406]  8e-72 G3DSA:3.40.50.620
G3DSA:3.40.50.620   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 532 amino acids
molecular mass 57,726.08 Da
pI 4.59
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.5
(56aa)		10.5
(56aa)		9
(48aa)		4.3
(23aa)		2.4
(13aa)		1.3
(7aa)		5.3
(28aa)		1.1
(6aa)		9.6
(51aa)		3.9
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6
(32aa)		0.8
(4aa)		2.4
(13aa)		4.5
(24aa)		2.1
(11aa)		2.3
(12aa)		1.9
(10aa)		7.3
(39aa)		5.3
(28aa)		9.4
(50aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-019 MDFO1S8503P10 732,754 760,396 27,643

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.