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CDS Information : KRH_06830

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 742,655 / 746,548 / +
Location 742655..746548
Type CDS
Length 3,894 bp (1,297 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtB2GJK1
INSDBAG29030.1 (DDBJ GenBank EMBL)
UniParcUPI0001733E56

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0A0JYX7_ARTS2Putative uncharacterized proteinAlignment
2E=0A1R8K3_ARTATPutative uncharacterized proteinAlignment
3E=1e-165Q6AGE7_LEIXXPutative uncharacterized proteinAlignment
4E=1e-157A4AI91_9ACTNPutative uncharacterized proteinAlignment
5E=1e-157A5CTU6_CLAM3Putative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR011335 Restriction endonuclease, type II-like, core (Domain)
 [1228-1268]  0.0034 SSF52980
SSF52980   Restriction endonuclease-like
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 1297 amino acids
molecular mass 141,553.31 Da
pI 6.15
aa composition
AlaValLeuIlePheTrpProMetGlySer
13.8
(179aa)
9.2
(119aa)
11
(143aa)
1.8
(23aa)
2.1
(27aa)
1.2
(16aa)
6
(78aa)
1.4
(18aa)
5.8
(75aa)
6.3
(82aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.6
(86aa)
0.1
(1aa)
1
(13aa)
4.2
(54aa)
1.2
(16aa)
1
(13aa)
3.5
(46aa)
10.1
(131aa)
6.5
(84aa)
7.2
(93aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-019 MDFO1S8503P10 732,754 760,396 27,643

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.