CDS Information : KRH_08220

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	889,544 / 890,377 / +
Location	889544..890377
Type	CDS
Length	834 bp (277 aa)

Product	N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
Gene name	mshB
Functional category	Metabolism - Others
EC number
Note	Involved in mycothiol biosynthesis.
KEGG pathway
Sequence feature
References	Uniprot:O50426 Pubmed:11092856

UniProt	B2GKP0
INSD	BAG29169.1 (DDBJ GenBank EMBL)
UniParc	UPI00017341BC

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=7e-46 A6W733_KINRA LmbE family protein Alignment 2 E=7e-40 Q82IJ5_STRAW Putative N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase Alignment 3 E=6e-39 A1SFT8_NOCSJ LmbE family protein Alignment 4 E=1e-38 Q47SP3_THEFY Putative uncharacterized protein Alignment 5 E=2e-38 Q9F344_STRCO Putative uncharacterized protein SCO5126 Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR003737 N-acetylglucosaminylphosphatidylinositol deacetylase (Family) PF02585   PIG-L PTHR12993   N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED IPR024078 Putative deacetylase LmbE-like domain (Domain) SSF102588   LmbE-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	277 amino acids
molecular mass	28,853.92 Da
pI	4.55
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 19.9 (55aa) 6.5 (18aa) 6.5 (18aa) 2.9 (8aa) 2.2 (6aa) 1.1 (3aa) 7.6 (21aa) 2.2 (6aa) 8.7 (24aa) 4.3 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.2 (20aa) 0.4 (1aa) 1.1 (3aa) 2.2 (6aa) 2.9 (8aa) 0.7 (2aa) 4 (11aa) 6.1 (17aa) 9 (25aa) 4.7 (13aa)

>KRH_08220 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
GTGGACCCCGCCCGGGCGCGTCTGCTGTTCGTGCACGCCCACCCGGACGACGAGGCGATC
AACACCGCGGCCACCATGGGCCACTACAGCGGCCGGGGGGCCACCACGGTGCTGCTGACC
ATGACGCGCGGTGAGCGCGGGGAGGTCATCCCGCCCGCGCTGCGCCACCTCGAGGTGGGC
CAGCCGGGCTGCCCGGACACGGACGGCACCGCCCTGGGGTTGTACCGGATCTCCGAGCTC
GACGACGCCGCGGCCGCCACGGGTCTCACCGACCGGTTCTACGCGGGGGAGCCCCCCGCG
CTGGACGCCTCCGTGGGCTTCGCCAACGGTGCGGGGAAGTACGTGGACTCCGGCATGAGC
TGGGGCCCCGACGGCTTCGCCCAGCCGGCCGCGGACGTGTCCCCGGCCGCTCTGACGGCC
GCGGACCCGGAGGAGGCCGCGGCCCACGTGGCCGCCACCATCCGGGCGCTGCGGCCCCAC
GCCGTGGTCAGCTACGCGGACGACGGCGGCTACGGCCACCCCGACCACGTGGCCACCCAC
CGGATCACCGTGCGCGCCGTCGAGGCGGCCGCCGCGTCCGACGACGCCGAGTACCCCGCG
TGGGACGTGCCCCTGACGTGGGGGATCGAGTCCGAGGTGGACCCCGCGGATGCGCGTCCC
CAGGCCGCGATCCACGGGGACCTCGCGGTCAAGCGCGCCGCCATGGCTGCGCACGCCACC
CAGATCGTGCTCGCGCAGGACCCCGCCGATCCCTCGTACACGATGTCCAACGGCGTGCCC
CAGACCTTCAGTGCCACGGAGACCTTCCGGCTGCTGCGAGGGGACCGGGCATGA


>KRH_08220 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
MDPARARLLFVHAHPDDEAINTAATMGHYSGRGATTVLLTMTRGERGEVIPPALRHLEVG
QPGCPDTDGTALGLYRISELDDAAAATGLTDRFYAGEPPALDASVGFANGAGKYVDSGMS
WGPDGFAQPAADVSPAALTAADPEEAAAHVAATIRALRPHAVVSYADDGGYGHPDHVATH
RITVRAVEAAAASDDAEYPAWDVPLTWGIESEVDPADARPQAAIHGDLAVKRAAMAAHAT
QIVLAQDPADPSYTMSNGVPQTFSATETFRLLRGDRA

NBRC No.	clone name	start	stop	length(bp)
G09-001-039	MDFO1S8501F24	875,193	913,811	38,619
G09-002-024	MDFO1S8501E19	862,285	896,191	33,907

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.